RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NRP2O60462 931 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TMCC2O75069 709 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TCEA3O75764 348 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 KRT36O76013 467 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 KCNA5P22460 613 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 L1CAMP32004 1257 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CRHR2Q13324 411 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 FBXO42Q6P3S6 717 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 MREGQ8N565 214 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CPSF7Q8N684 471 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PLEKHG4BQ96PX9 1271 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TAPBPLQ9BX59 468 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 LRRC4CQ9HCJ2 640 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CLDND1Q9NY35 253 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CKLFQ9UBR5 152 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 COL6A2P12110 1019 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 LMO2P25791 158 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CTSOP43234 321 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CASP9P55211 416 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 QPRTQ15274 297 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 GDF6Q6KF10 455 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PRSS58Q8IYP2 241 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 SFRP1Q8N474 314 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 C4orf32Q8N8J7 132 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 SIDT2Q8NBJ9 832 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PSMG2Q969U7 264 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 DSN1Q9H410 356 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CCL22O00626 93 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CFIP05156 583 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 TIE1P35590 1138 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PBX3P40426 434 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 BLKP51451 505 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ADARP55265 1226 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 IL10RBQ08334 325 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 LRRC73Q5JTD7 316 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 LDLRAP1Q5SW96 308 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PIK3R6Q5UE93 754 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 FOXR2Q6PJQ5 311 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 IFNL1Q8IU54 200 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 OSBPL11Q9BXB4 747 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 FZD10Q9ULW2 581 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 BCL9LQ86UU0 1499 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 DDX3YO15523 660 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 LRCH4O75427 683 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 LYNP07948 512 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 NR2F6P10588 404 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 HSPB3Q12988 150 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 AMZ1Q400G9 498 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 GALNT5Q7Z7M9 940 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 GALNT7Q86SF2 657 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 TSTD1Q8NFU3 115 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 SLC22A17Q8WUG5 538 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 C12orf66Q96MD2 445 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ABCB10Q9NRK6 738 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PTDSS1P48651 473 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 SLC13A2Q13183 592 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CCL14Q16627 93 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 RALGPS2Q86X27 583 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF567Q8N184 647 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 SLC44A1Q8WWI5 657 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 EBPLQ9BY08 206 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 FAM25EA8MYX2 175 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 HAT1O14929 419 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 B3GALT2O43825 422 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 FSHRP23945 695 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CAPGP40121 348 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 MTHFRP42898 656 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CTSKP43235 329 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 DGKEP52429 567 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 FBXO48Q5FWF7 155 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ERICH5Q6P6B1 374 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ARHGAP22Q7Z5H3 698 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 CROCCP3Q8IVE0 287 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 FUKQ8N0W3 1084 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 SLC34A3Q8N130 599 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PJA1Q8NG27 643 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF483Q8TF39 744 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 TSEN15Q8WW01 171 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 PPM1MQ96MI6 270 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 ERVK-11Q9UQG0 969 aa10.29□□□□□ -0.76
COL4A6-203ENST00000394872 TMA7Q9Y2S6 64 aaKnown RBP10.29□□□□□ -0.76
COL4A6-203ENST00000394872 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 TGDSO95455 350 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CSKP41240 450 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 MTMR14Q8NCE2 650 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ALG3Q92685 438 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SEZ6LQ9BYH1 1024 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ERVK-5Q9HDB9 667 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 IL36AQ9UHA7 158 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 FBXW11Q9UKB1 542 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 UGT2B11O75310 529 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SYN1P17600 705 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CDKN2BP42772 138 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CDK9P50750 372 aaKnown RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PGDP52209 483 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ACLYP53396 1101 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms