RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 SSR2P43308 183 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 PPIGQ13427 754 aaKnown RBP eCLIP9.02□□□□□ -0.96
CDH11-202ENST00000394156 NAB1Q13506 487 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 PPP1R3AQ16821 1122 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 KBTBD2Q8IY47 623 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 LRTOMTQ8WZ04 291 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 ADAMTS10Q9H324 1103 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 ANAPC2Q9UJX6 822 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 CA14Q9ULX7 337 aa9.02□□□□□ -0.96
CDH11-202ENST00000394156 IRAK2O43187 625 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CDC123O75794 336 aaPredicted RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 NUDT17P0C025 328 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CD72P21854 359 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 APLP1P51693 650 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ZNF132P52740 706 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 PTPN5P54829 565 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 TRMT5Q32P41 509 aaKnown RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 RFX4Q33E94 735 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 ZNF549Q6P9A3 640 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ZNF662Q6ZS27 426 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 GTPBP3Q969Y2 492 aaKnown RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 SUSD3Q96L08 255 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ADPRHL2Q9NX46 363 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 SH3GLB1Q9Y371 365 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 LOXHD1Q8IVV2 1947 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 SCN9AQ15858 1988 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 MTMR11A4FU01 709 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 LRRC72A6NJI9 287 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CACNB4O00305 520 aaPredicted RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 SYN3O14994 580 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 OR10H3O60404 316 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 EDF1O60869 148 aaKnown RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 DIRAS1O95057 198 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 MLYCDO95822 493 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 COL6A1P12109 1028 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CDK7P50613 346 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 POLR2JP52435 117 aaKnown RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 RNF43Q68DV7 783 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 LNX2Q8N448 690 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 OR10A6Q8NH74 314 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ANKRD31Q8N7Z5 1873 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 PSMD9O00233 223 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 OTCP00480 354 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 SERPINA6P08185 405 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CBLP22681 906 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 VIPR2P41587 438 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 FOLH1Q04609 750 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CARTPTQ16568 116 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 C9orf64Q5T6V5 341 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 CDCA2Q69YH5 1023 aaPredicted RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 LRRC39Q96DD0 335 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 GAL3ST1Q99999 423 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 BDH2Q9BUT1 245 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 GTPBP2Q9BX10 602 aaKnown RBP9.02□□□□□ -0.97
CDH11-202ENST00000394156 OSBPL10Q9BXB5 764 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 RAB23Q9ULC3 237 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ZNF780BQ9Y6R6 833 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 MCM3APO60318 1980 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 NTSP30990 170 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 SEPHS1P49903 392 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 TAS2R41P59536 307 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 MTAPQ13126 283 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 MBLAC2Q68D91 279 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 FBXL18Q96ME1 805 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 ZNF778Q96MU6 729 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 VPS35Q96QK1 796 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 STRA6Q9BX79 667 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 REEP1Q9H902 201 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 KCNK6Q9Y257 313 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 POLR1DQ9Y2S0 133 aa9.02□□□□□ -0.97
CDH11-202ENST00000394156 C5orf60A6NFR6 353 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 CAPN8A6NHC0 703 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 F2P00734 622 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 AHSGP02765 367 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 ZNF865P0CJ78 1059 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 ADH5P11766 374 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MYOGP15173 224 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 ALOX12P18054 663 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 HOXA11P31270 313 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 RPL4P36578 427 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 PXNP49023 591 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 CDKN1CP49918 316 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 DGKQP52824 942 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 CACNG1Q06432 222 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MRPL28Q13084 256 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 SMARCD3Q6STE5 483 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MACC1Q6ZN28 852 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TMPRSS9Q7Z410 1059 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LMNTD1Q8N9Z9 388 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 PPCDCQ96CD2 204 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GAL3ST4Q96RP7 486 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 BCO2Q9BYV7 579 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 PAIP1Q9H074 479 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 G3V2T6 193 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 HDAC3O15379 428 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms