RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 BBS5Q8N3I7 341 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 NKAPQ8N5F7 415 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 NUSAP1Q9BXS6 441 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 SPC25Q9HBM1 224 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 CD320Q9NPF0 282 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 PKD2L2Q9NZM6 624 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 ZFP37Q9Y6Q3 630 aaPredicted RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 E5RI56 91 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 SNAP91O60641 907 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 MLYCDO95822 493 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 ALBP02768 609 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 NFKBIAP25963 317 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 CTGFP29279 349 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 LETMD1Q6P1Q0 360 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 XKR5Q6UX68 686 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 TAS2R42Q7RTR8 314 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 RTN4RL1Q86UN2 441 aaPredicted RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 SFRP1Q8N474 314 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 METTL6Q8TCB7 284 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 MUS81Q96NY9 551 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 BRINP2Q9C0B6 783 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 PLGRKTQ9HBL7 147 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 RIC8BQ9NVN3 520 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 IFT80Q9P2H3 777 aaPredicted RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
GAPVD1-205ENST00000394084 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 E2F3O00716 465 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 STX16O14662 325 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 CAPN1P07384 714 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 G6PDP11413 515 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 POLR2IP36954 125 aaKnown RBP13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 IL2P60568 153 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 PRKG2Q13237 762 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 PDCD4Q53EL6 469 aaKnown RBP13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 ELMSAN1Q6PJG2 1045 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 MGME1Q9BQP7 344 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 PRLP01236 227 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 OXCT1P55809 520 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 EMX2Q04743 252 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 NR6A1Q15406 480 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 DTWD1Q8N5C7 304 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 CD200R1Q8TD46 325 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 ADAMTS16Q8TE57 1224 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 FAM193BQ96PV7 902 aaPredicted RBP13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 BDH2Q9BUT1 245 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 LRRC3Q9BY71 257 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 GREB1Q4ZG55 1949 aa13.78□□□□□ -0.2
GAPVD1-205ENST00000394084 CBX4O00257 560 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 INSIG1O15503 277 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 UMPSP11172 480 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 TCF3P15923 654 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 ITGB6P18564 788 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 PIK3CGP48736 1102 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 IST1P53990 364 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 TAF1AQ15573 450 aaPredicted RBP13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 KCNA10Q16322 511 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 TXNDC11Q6PKC3 985 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 ITIH5Q86UX2 942 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 STK32CQ86UX6 486 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 ZFAND4Q86XD8 727 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 HID1Q8IV36 788 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 CLEC4FQ8N1N0 589 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 MUC13Q9H3R2 512 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 LTB4R2Q9NPC1 389 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 ZMYM5Q9UJ78 669 aa13.77□□□□□ -0.2
GAPVD1-205ENST00000394084 KANSL1LA0AUZ9 987 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 RSL1D1O76021 490 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 IGLV3-27P01718 113 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 HNRNPCP07910 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 HTR1EP28566 365 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 SHMT2P34897 504 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 HUNKP57058 714 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 BNIP3Q12983 259 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 TGFBIQ15582 683 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 DHRS4L2Q6PKH6 230 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 PAPD5Q8NDF8 572 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 TMBIM1Q969X1 311 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 NACA2Q9H009 215 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 NTN4Q9HB63 628 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 ZIM2Q9NZV7 527 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 ANKRD36A6QL64 1941 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 TYW5A2RUC4 315 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 TRIM64A6NGJ6 449 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 LPOP22079 712 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 ADARB1P78563 741 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms