RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PRKAA1Q13131 559 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 SMAD4Q13485 552 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 STARD3Q14849 445 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 CST6Q15828 149 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 TTLL9Q3SXZ7 439 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 RPS27LQ71UM5 84 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 MYO1HQ8N1T3 1032 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 SLC44A3Q8N4M1 653 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 HDDC3Q8N4P3 179 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 GBP7Q8N8V2 638 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 EZH1Q92800 747 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 RAB7BQ96AH8 199 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NUS1Q96E22 293 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 DTD2Q96FN9 168 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 COQ10AQ96MF6 247 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ATOH8Q96SQ7 321 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 SIKE1Q9BRV8 207 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 EML4Q9HC35 981 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 SMOXQ9NWM0 555 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 UTP6Q9NYH9 597 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 CD274Q9NZQ7 290 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 RRP15Q9Y3B9 282 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 LRRK1Q38SD2 2015 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 IGLV3-16A0A075B6K0 115 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 PCDH8O95206 1070 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 SIX3O95343 332 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 KLF8O95600 359 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 ADH1BP00325 375 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ASGR2P07307 311 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 GM2AP17900 193 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 TSPAN8P19075 237 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 NTSR1P30989 418 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 GPR1P46091 355 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 HERVK_113P63132 956 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 CCDC15Q0P6D6 951 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 GRSF1Q12849 480 aaKnown RBP eCLIP8.52□□□□□ -1.05
TDP1-203ENST00000393454 CAMK2GQ13555 558 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 ENPP2Q13822 863 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 TMEM52BQ4KMG9 183 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ACSBG2Q5FVE4 666 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 SH2D4BQ5SQS7 431 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 LDLRAP1Q5SW96 308 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ZNF678Q5SXM1 525 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 VWA5B1Q5TIE3 1220 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 RAET1GQ6H3X3 334 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ALYREFQ86V81 257 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 RALGPS2Q86X27 583 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 LSMEM2Q8N112 164 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 DTX3LQ8TDB6 740 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 SKA2Q8WVK7 121 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 BTN2A2Q8WVV5 523 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 GLYATL1Q969I3 302 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 FUBP1Q96AE4 644 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 PDLIM5Q96HC4 596 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 PPP1R36Q96LQ0 422 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 EBF4Q9BQW3 602 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 RSPH9Q9H1X1 276 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 C8orf33Q9H7E9 229 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 KCTD5Q9NXV2 234 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 NFKBIL1Q9UBC1 381 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 FAM8A1Q9UBU6 413 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ZDHHC2Q9UIJ5 367 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 APOBEC2Q9Y235 224 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 FIS1Q9Y3D6 152 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 F5P12259 2224 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 A0A1W2PP55 124 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 OR2AG2A6NM03 316 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 RNASEH2AO75792 299 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 S100BP04271 92 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 MTHFD2P13995 350 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 C5AR1P21730 350 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 CCR7P32248 378 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 SERPINB5P36952 375 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 IDH3AP50213 366 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 NFKB2Q00653 900 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 HSPA14Q0VDF9 509 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 BOP1Q14137 746 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 SPRED3Q2MJR0 410 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 HSF5Q4G112 596 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 KHDC1Q4VXA5 237 aaKnown RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 LACTB2Q53H82 288 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 UNC50Q53HI1 259 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 FBXO48Q5FWF7 155 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 PIP5KL1Q5T9C9 394 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 KIAA1211LQ6NV74 962 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 CYP2U1Q7Z449 544 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 AADATQ8N5Z0 425 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 OR2T3Q8NH03 318 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 L3HYPDHQ96EM0 354 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 FAM126AQ9BYI3 521 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 COG4Q9H9E3 785 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 LATS2Q9NRM7 1088 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 MBD1Q9UIS9 605 aaPredicted RBP8.52□□□□□ -1.05
TDP1-203ENST00000393454 FADS3Q9Y5Q0 445 aa8.52□□□□□ -1.05
TDP1-203ENST00000393454 MYO10Q9HD67 2058 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 CKAP5Q14008 2032 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms