RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 DNAJB5O75953 348 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 IPO13O94829 963 aaKnown RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 CBX6O95503 412 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ASMTLO95671 621 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 KLK3P07288 261 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 IVLP07476 585 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ANKRD34CP0C6C1 535 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 CYP2A6P11509 494 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 F8A1P23610 371 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 PTGER4P35408 488 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ETV3P41162 512 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 GPR1P46091 355 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ITGA1P56199 1179 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 DENND2CQ68D51 928 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 DOK6Q6PKX4 331 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 LIPIQ6XZB0 460 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 MED25Q71SY5 747 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 FAM131BQ86XD5 332 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 NRROSQ86YC3 692 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ARHGEF19Q8IW93 802 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 PATE1Q8WXA2 126 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ZDHHC12Q96GR4 267 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 TCTN2Q96GX1 697 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 SGSM3Q96HU1 749 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ELMO2Q96JJ3 720 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 TBCBQ99426 244 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 LGR4Q9BXB1 951 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 TEX101Q9BY14 249 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 UNKQ9C0B0 810 aaKnown RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 CHST11Q9NPF2 352 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 LHX9Q9NQ69 397 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 C5AR2Q9P296 337 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 COPG2Q9UBF2 871 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ZNHIT2Q9UHR6 403 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 FARSAQ9Y285 508 aaKnown RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.78□□□□□ -1.16
CASP4-201ENST00000393150 ACTL7AQ9Y615 435 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 CCDC168Q8NDH2 2452 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 KIR2DS5A0A0G2JLQ3 304 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 A0A0G2JNG1 304 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 BICDL2A1A5D9 508 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 TSPAN11A1L157 253 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 A6NL46 340 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 KIR2DS3K7RE56 304 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 PDPK1O15530 556 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 LRRTM2O43300 516 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 BUB1BO60566 1050 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 SPAG6O75602 509 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 PALMO75781 387 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 CD160O95971 181 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 IGLV1-40P01703 118 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 IGHEP01854 428 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ERBB2P04626 1255 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 TP53P04637 393 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 CEACAM5P06731 702 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 COX6B1P14854 86 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 EPHB2P29323 1055 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 SDC4P31431 198 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 PRCPP42785 496 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 GLRBP48167 497 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 RENBPP51606 427 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 NDST2P52849 883 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 CDK3Q00526 305 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 KIR2DS5Q14953 304 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 KYNUQ16719 465 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ANKRD39Q53RE8 183 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 VWA2Q5GFL6 755 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ZNF658Q5TYW1 1059 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 PAPD7Q5XG87 772 aaKnown RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 AFMIDQ63HM1 303 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 C22orf34Q6ZV56 151 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 DPPA4Q7L190 304 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ZNF761Q86XN6 746 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 CAMK1DQ8IU85 385 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 CREBRFQ8IUR6 639 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 SFRP1Q8N474 314 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 ZADH2Q8N4Q0 377 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 CISD2Q8N5K1 135 aaKnown RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 ARFGAP1Q8N6T3 406 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 SLC37A2Q8TED4 501 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 NT5C3BQ969T7 300 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 DHTKD1Q96HY7 919 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 EXOC2Q96KP1 924 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 C9orf72Q96LT7 481 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 FCRL4Q96PJ5 515 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 SRPK1Q96SB4 655 aaKnown RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 CINPQ9BW66 212 aaPredicted RBP7.78□□□□□ -1.16
CASP4-201ENST00000393150 ASPNQ9BXN1 380 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 LUZP4Q9P127 313 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 RCOR1Q9UKL0 485 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 RARRES3Q9UL19 164 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 B3GNT3Q9Y2A9 372 aa7.78□□□□□ -1.16
CASP4-201ENST00000393150 MTORP42345 2549 aa7.77□□□□□ -1.17
CASP4-201ENST00000393150 ABCA2Q9BZC7 2435 aa7.77□□□□□ -1.17
CASP4-201ENST00000393150 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.77□□□□□ -1.17
CASP4-201ENST00000393150 ANKRD62A6NC57 917 aa7.77□□□□□ -1.17
CASP4-201ENST00000393150 GOLGA6L4A6NEF3 574 aa7.77□□□□□ -1.17
CASP4-201ENST00000393150 ARHGAP42A6NI28 874 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms