RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SLC1A5Q15758 541 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 BZW1Q7L1Q6 419 aaKnown RBP16.3■□□□□ 0.2
PTPRK-208ENST00000392449 GLT6D1Q7Z4J2 308 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 RASGEF1AQ8N9B8 481 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 VPS35Q96QK1 796 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 FCRL5Q96RD9 977 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 FAM118BQ9BPY3 351 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 TRIM5Q9C035 493 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 STARD5Q9NSY2 213 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 SIDT1Q9NXL6 827 aaKnown RBP16.3■□□□□ 0.2
PTPRK-208ENST00000392449 IL17CQ9P0M4 197 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 CAPN5O15484 640 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 NKX2-8O15522 239 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 PRKAR1AP10644 381 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 ZNF28P17035 718 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 RBL1P28749 1068 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 SPAM1P38567 509 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 PPP1CAP62136 330 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 FOXM1Q08050 763 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 GPR18Q14330 331 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 CEACAM20Q6UY09 585 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 FAM83HQ6ZRV2 1179 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 PLXDC1Q8IUK5 500 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 NLGN4XQ8N0W4 816 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 NLGN4YQ8NFZ3 816 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 GPR150Q8NGU9 434 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 C9orf72Q96LT7 481 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 FAM117AQ9C073 453 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 SLC40A1Q9NP59 571 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 FBXO8Q9NRD0 319 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 IL17BQ9UHF5 180 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 RSPH14Q9UHP6 348 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 PSMD13Q9UNM6 376 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 MYO18BQ8IUG5 2567 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 OR2AG2A6NM03 316 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 POLR1CO15160 346 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 LCA5LO95447 670 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 AGTP01019 485 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 C9P02748 559 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 AMD1P17707 334 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 PBLDP30039 288 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 PPP2R5EQ16537 467 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 ATP1A1-AS1Q5TC04 95 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 ABRAXAS1Q6UWZ7 409 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 FAM92BQ6ZTR7 304 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 MICALCLQ6ZW33 695 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 RCOR2Q8IZ40 523 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 CXorf40BQ96DE9 158 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 ELMO2Q96JJ3 720 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 TEFMQ96QE5 360 aaKnown RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 APOL2Q9BQE5 337 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 FICDQ9BVA6 458 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 EPB41L1Q9H4G0 881 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 GPN2Q9H9Y4 310 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-208ENST00000392449 UCK1Q9HA47 277 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 ARL5AQ9Y689 179 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
PTPRK-208ENST00000392449 SPTA1P02549 2419 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 GLYATL1P3A0A0U1RQE8 302 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 MACROD2A1Z1Q3 448 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 SOWAHDA6NJG2 315 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 H7C0C1 242 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 MTSS1O43312 755 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 RASSF9O75901 435 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 IDSP22304 550 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 ATP5OP48047 213 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 GTF2H3Q13889 308 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 NFE2L1Q14494 772 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 GPRC6AQ5T6X5 926 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 AADACL2Q6P093 401 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 BORAQ6PGQ7 559 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 SARM1Q6SZW1 724 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 DET1Q7L5Y6 550 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 BEND7Q8N7W2 519 aaPredicted RBP16.28■□□□□ 0.2
PTPRK-208ENST00000392449 AVL9Q8NBF6 648 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 SRPK1Q96SB4 655 aaKnown RBP16.28■□□□□ 0.2
PTPRK-208ENST00000392449 FSD1LQ9BXM9 530 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 TRABDQ9H4I3 376 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 POT1Q9NUX5 634 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 TMEM184BQ9Y519 407 aaPredicted RBP16.28■□□□□ 0.2
PTPRK-208ENST00000392449 KCTD3Q9Y597 815 aa16.28■□□□□ 0.2
PTPRK-208ENST00000392449 HEMK1Q9Y5R4 338 aaPredicted RBP16.28■□□□□ 0.2
PTPRK-208ENST00000392449 MRPS18BQ9Y676 258 aaKnown RBP16.28■□□□□ 0.2
PTPRK-208ENST00000392449 POP7O75817 140 aaKnown RBP16.27■□□□□ 0.19
PTPRK-208ENST00000392449 DLGAP3O95886 979 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 EPOP01588 193 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 ANKRD34CP0C6C1 535 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 HLA-DPA1P20036 260 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 TNNT3P45378 269 aaPredicted RBP16.27■□□□□ 0.19
PTPRK-208ENST00000392449 CAPZBP47756 277 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 POLE2P56282 527 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 MPP3Q13368 585 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 AGAP9Q5VTM2 703 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 IRGCQ6NXR0 463 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 RBM41Q96IZ5 413 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms