RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 BUB3O43684 328 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 LDB3O75112 727 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 AVILO75366 819 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 DGKAP23743 735 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 NMBRP28336 390 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 MATR3P43243 847 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 STAT2P52630 851 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 ZNF132P52740 706 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 ERVFC1-1P60608 527 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 RPL36AP83881 106 aaKnown RBP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 STXBP5Q5T5C0 1151 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 FAM171BQ6P995 826 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 ATG9AQ7Z3C6 839 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 GALNT13Q8IUC8 556 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 LINC00346Q8IVM7 164 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 NAGSQ8N159 534 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 MAB21L3Q8N8X9 362 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 MCUQ8NE86 351 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 OR52I2Q8NH67 350 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 CD101Q93033 1021 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 LRRC59Q96AG4 307 aaKnown RBP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 PHF21AQ96BD5 680 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 SLC22A18Q96BI1 424 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 LMLNQ96KR4 655 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 CTAGE1Q96RT6 745 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 GFI1Q99684 422 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 SEMA6AQ9H2E6 1030 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 CHMP1AQ9HD42 196 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 GIMAP4Q9NUV9 329 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 TRMT1Q9NXH9 659 aaKnown RBP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 TERF2IPQ9NYB0 399 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 PSD3Q9NYI0 1048 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 RCC2Q9P258 522 aaKnown RBP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 MARCH4Q9P2E8 410 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 KLHL9Q9P2J3 617 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 DNAJB4Q9UDY4 337 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 RABGAP1Q9Y3P9 1069 aa4.26□□□□□ -1.73
SNORA40.2-201ENST00000390847 ZCWPW2A0A1B0GU75 182 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 ASPDHA6ND91 283 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 ANKRD66B4E2M5 251 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PLK4O00444 970 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 NDUFS4O43181 175 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PAPSS1O43252 624 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 BUD23O43709 281 aaKnown RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 BMP10O95393 424 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 KRT19P08727 400 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 CETPP11597 493 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 VPREB1P12018 145 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PRLRP16471 622 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 AMD1P17707 334 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 NNMTP40261 264 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 LMAN1P49257 510 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 FMO5P49326 533 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 TERF1P54274 439 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PNLIPRP2P54317 469 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 POU3F1Q03052 451 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 TROAPQ12815 778 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PCLAFQ15004 111 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 FAM98BQ52LJ0 330 aaKnown RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 MFSD4BQ5TF39 518 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PLEKHM3Q6ZWE6 761 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 ZNF534Q76KX8 674 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 PRAG1Q86YV5 1406 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 DCP1BQ8IZD4 617 aaKnown RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 GBGT1Q8N5D6 347 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 LINGO1Q96FE5 620 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 OXNAD1Q96HP4 312 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 DACH2Q96NX9 599 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 POLR3CQ9BUI4 534 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 FKRPQ9H9S5 495 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 CPSF2Q9P2I0 782 aaKnown RBP4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 AMACRQ9UHK6 382 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 HACL1Q9UJ83 578 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 ZNF148Q9UQR1 794 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 DLGAP4Q9Y2H0 992 aa4.25□□□□□ -1.73
SNORA40.2-201ENST00000390847 LOC100509620A0A075B734 347 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 A6NL46 340 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 C16orf97H3BN30 126 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 DVL1O14640 695 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 ZWINTO95229 277 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 ARSEP51690 589 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 DVL1P1P54792 670 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 MLLT10P55197 1068 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 SNRPEP62304 92 aaKnown RBP4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 CXCL9Q07325 125 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 BMP2KLQ5H9B9 411 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 ALS2CLQ60I27 953 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 WBP2NLQ6ICG8 309 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 TMCO3Q6UWJ1 677 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 KCTD8Q6ZWB6 473 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 Q75L30 129 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 INTS8Q75QN2 995 aaKnown RBP4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 HAUS6Q7Z4H7 955 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 DSG4Q86SJ6 1040 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 SCML4Q8N228 414 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 KBTBD3Q8NAB2 608 aa4.24□□□□□ -1.73
SNORA40.2-201ENST00000390847 RDM1Q8NG50 284 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms