RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 EPHA4P54764 986 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 SNX1Q13596 522 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 C16orf72Q14CZ0 275 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 INSCQ1MX18 579 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 AMZ1Q400G9 498 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 GPR33Q49SQ1 333 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 TMEM220Q6QAJ8 160 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 SNX20Q7Z614 316 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 PRUNE1Q86TP1 453 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 LINC00523Q86TU6 105 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC9B2Q86UD5 537 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 FBXO39Q8N4B4 442 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR4D9Q8NGE8 314 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 STYXQ8WUJ0 223 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 SH3KBP1Q96B97 665 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 LRRC45Q96CN5 670 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 PDLIM2Q96JY6 352 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 DNAJC1Q96KC8 554 aaKnown RBP11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZCCHC2Q9C0B9 1178 aaKnown RBP11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 B3GNT4Q9C0J1 378 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 KCNF1Q9H3M0 494 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 ASB8Q9H765 288 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 SYNDIG1Q9H7V2 258 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 EPB41L5Q9HCM4 733 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 THSD1Q9NS62 852 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 ACSL6Q9UKU0 697 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 RIMKLBQ9ULI2 386 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 PCDHGA7Q9Y5G6 932 aa11.2□□□□□ -0.62
IGHV4-28-201ENST00000390612 GOLGA6L3A6NEY3 463 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 HGSO14964 777 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 SNX2O60749 519 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 TNFSF15O95150 251 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 FGGP02679 453 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 THRAP10827 490 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 IDSP22304 550 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 ITPKBP27987 946 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 RBMS1P29558 406 aaKnown RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 GRIA1P42261 906 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 PCBP4P57723 403 aaKnown RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 TRA2AQ13595 282 aaKnown RBP eCLIP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 GTF2H3Q13889 308 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 POU6F1Q14863 301 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 CLCA4Q14CN2 919 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 PLA2G4EQ3MJ16 856 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZNF658BQ4V348 819 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 BCL7AQ4VC05 210 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 NKAIN2Q5VXU1 208 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 METRNLQ641Q3 311 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 TMEM71Q6P5X7 295 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 WDR74Q6RFH5 385 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 C19orf48Q6RUI8 117 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 FAM83HQ6ZRV2 1179 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 MICALCLQ6ZW33 695 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 AMZ2Q86W34 360 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZNF761Q86XN6 746 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 TRAPPC5Q8IUR0 188 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 NXPE1Q8N323 547 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 RASGEF1CQ8N431 466 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 PRELID2Q8N945 189 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZNF248Q8NDW4 579 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 GDAP1Q8TB36 358 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 HNRNPLLQ8WVV9 542 aaKnown RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCDC97Q96F63 343 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 CDKN2AIPNLQ96HQ2 116 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZNF514Q96K75 400 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 RANBP9Q96S59 729 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC38A3Q99624 504 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 EPB41L1Q9H4G0 881 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 KCNK4Q9NYG8 393 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 TMEM9Q9P0T7 183 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 PAK5Q9P286 719 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 TTC7AQ9ULT0 858 aaPredicted RBP11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 DNAJC16Q9Y2G8 782 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 WDR37Q9Y2I8 494 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 JRKLQ9Y4A0 524 aa11.19□□□□□ -0.62
IGHV4-28-201ENST00000390612 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 KLHL33A6NCF5 533 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 MGAT4DA6NG13 374 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR2AG2A6NM03 316 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCL22O00626 93 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 NVLO15381 856 aaKnown RBP11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 RRP8O43159 456 aaKnown RBP11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 CEP104O60308 925 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 IFNB1P01574 187 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZSCAN5DPP0CG00 497 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 HGFP14210 728 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 VCLP18206 1134 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 CXCR5P32302 372 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 ETV5P41161 510 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 CDKN1CP49918 316 aaPredicted RBP11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 ARSDP51689 593 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 TLE3Q04726 772 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 ACVR1Q04771 509 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 CDH17Q12864 832 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms