RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 C6orf136Q5SQH8 315 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 INTS11Q5TA45 600 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 KIAA1841Q6NSI8 718 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 ZBTB49Q6ZSB9 765 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 TRIM73Q86UV7 250 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 TMEM199Q8N511 208 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 OR2T11Q8NH01 316 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 GRIN3AQ8TCU5 1115 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 RNF11Q9Y3C5 154 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 SLC30A1Q9Y6M5 507 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 ZNF106Q9H2Y7 1883 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 FAM234BA2RU67 622 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 ASPDHA6ND91 283 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 OR4F21O95013 312 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 EEFSECP57772 596 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 PLD1Q13393 1074 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 NFYCQ13952 458 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 CAPRIN1Q14444 709 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 TAF12Q16514 161 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 IYDQ6PHW0 289 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 ADAMTSL2Q86TH1 951 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 CARNMT1Q8N4J0 409 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 MFSD2AQ8NA29 543 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 HJURPQ8NCD3 748 aaPredicted RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 PPWD1Q96BP3 646 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 EID2BQ96D98 161 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 ALG14Q96F25 216 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 TEX37Q96LM6 180 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 PRPF18Q99633 342 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 CIB1Q99828 191 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 AGPAT4Q9NRZ5 378 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 EIF2B4Q9UI10 523 aaKnown RBP14.78□□□□□ -0.04
SCFD2-201ENST00000388940 ASB1Q9Y576 335 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 PCDHB9Q9Y5E1 797 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 CEP350Q5VT06 3117 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 MICAL3Q7RTP6 2002 aa14.78□□□□□ -0.04
SCFD2-201ENST00000388940 CCDC154A6NI56 674 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 C9JVG2 144 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 HTRA2O43464 458 aaPredicted RBP14.77□□□□□ -0.04
SCFD2-201ENST00000388940 AKAP10O43572 662 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 GPIP06744 558 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 PSMA4P25789 261 aaKnown RBP14.77□□□□□ -0.04
SCFD2-201ENST00000388940 POLR2JP52435 117 aaKnown RBP14.77□□□□□ -0.04
SCFD2-201ENST00000388940 ERVPABLB-1P60509 514 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 UFM1P61960 85 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 TWF1Q12792 350 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 LSAMPQ13449 338 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 VEPH1Q14D04 833 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 PTPRRQ15256 657 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 NHSL2Q5HYW2 709 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 TBCELQ5QJ74 424 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 ARMC12Q5T9G4 340 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 PRR23BQ6ZRT6 265 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 Q6ZSR9 355 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 SPPL2CQ8IUH8 684 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 PIH1D2Q8WWB5 315 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 ANKRD60Q9BZ19 345 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 GPR63Q9BZJ6 419 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 C8orf4Q9NR00 106 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 HEBP1Q9NRV9 189 aa14.77□□□□□ -0.04
SCFD2-201ENST00000388940 SCN8AQ9UQD0 1980 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 ARPC2O15144 300 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 GREM1O60565 184 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 PGLSO95336 258 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 SOD2P04179 222 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.05
SCFD2-201ENST00000388940 IMPDH2P12268 514 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 NR1H2P55055 460 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 DYNC1I2Q13409 638 aaKnown RBP14.77□□□□□ -0.05
SCFD2-201ENST00000388940 PAGE3Q5JUK9 113 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 BORAQ6PGQ7 559 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 LYSMD3Q7Z3D4 306 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 ADGRG5Q8IZF4 528 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 METTL25Q8N6Q8 603 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 DCAF4L2Q8NA75 395 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 ACOX2Q99424 681 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 DUS2Q9NX74 493 aaKnown RBP14.77□□□□□ -0.05
SCFD2-201ENST00000388940 VPS51Q9UID3 782 aa14.77□□□□□ -0.05
SCFD2-201ENST00000388940 KIAA1671Q9BY89 1806 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 KANSL1LA0AUZ9 987 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 OR6B1O95007 311 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 PARNO95453 639 aaKnown RBP14.76□□□□□ -0.05
SCFD2-201ENST00000388940 PRAMEF12O95522 483 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 UMPSP11172 480 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 ZNF7P17097 686 aaPredicted RBP14.76□□□□□ -0.05
SCFD2-201ENST00000388940 FASP25445 335 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 GSK3BP49841 420 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 YBX1P67809 324 aaKnown RBP14.76□□□□□ -0.05
SCFD2-201ENST00000388940 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
SCFD2-201ENST00000388940 EMX2Q04743 252 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 FXNQ16595 210 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 NADK2Q4G0N4 442 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 ATP6AP1LQ52LC2 224 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 SBSNQ6UWP8 590 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 TMEM150AQ86TG1 271 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 CAMK1DQ8IU85 385 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 FAM217AQ8IXS0 508 aa14.76□□□□□ -0.05
SCFD2-201ENST00000388940 DPP10Q8N608 796 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms