RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CPP00450 1065 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 F2P00734 622 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NGFP01138 241 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TCP1P17987 556 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OXTRP30559 389 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 BTCP35070 178 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MDH2P40926 338 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TFPI2P48307 235 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PPP3CCP48454 512 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GIPRP48546 466 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 STK19P49842 368 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TERF1P54274 439 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ADORA2A-AS1P86434 159 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CYCSP99999 105 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OCRLQ01968 901 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LGALS3BPQ08380 585 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OS9Q13438 667 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FGL2Q14314 439 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IHHQ14623 411 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RASA3Q14644 834 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CDONQ4KMG0 1287 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ACSM2BQ68CK6 577 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PHLDB3Q6NSJ2 640 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC30A10Q6XR72 485 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SIGLEC15Q6ZMC9 328 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IL34Q6ZMJ4 242 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TCF24Q7RTU0 167 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRSS41Q7RTY9 318 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ADM2Q7Z4H4 148 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 USP37Q86T82 979 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MIR7-3HGQ8N6C7 128 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MDS2Q8NDY4 140 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 C1orf64Q8NEQ6 169 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NUP37Q8NFH4 326 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ATP8B4Q8TF62 1192 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC20A1Q8WUM9 679 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RSC1A1Q92681 617 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KAT2BQ92831 832 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CDCA5Q96FF9 252 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC35A4Q96G79 324 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NEUROD6Q96NK8 337 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ATF6BQ99941 703 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DPCDQ9BVM2 203 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FAIM2Q9BWQ8 316 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IPPKQ9H8X2 491 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LINC00574Q9H8X3 128 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SMURF2Q9HAU4 748 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NMRK2Q9NPI5 230 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NECTIN3Q9NQS3 549 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RXFP3Q9NSD7 469 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RNF146Q9NTX7 359 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TEX10Q9NXF1 929 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MOCS1Q9NZB8 636 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IPO11Q9UI26 975 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SERTAD3Q9UJW9 196 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NAALADL1Q9UQQ1 740 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 YTHDF2Q9Y5A9 579 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SNX9Q9Y5X1 595 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CACNG2Q9Y698 323 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 U3KQK5 164 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RELNP78509 3460 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 UTP20O75691 2785 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CSPG4Q6UVK1 2322 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CSMD1Q96PZ7 3565 aa-2.35□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MED13LQ71F56 2210 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FLT1P17948 1338 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SPATA31A5Q5VU36 1347 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SPATA31A7Q8IWB4 1347 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TET1Q8NFU7 2136 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LOC105371242A0A075B767 164 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IGHV4-30-2A0A087WSY4 118 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GRIFINA4D1Z8 144 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MSGN1A6NI15 193 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SAC3D1A6NKF1 404 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FAM47E-STBD1D6RA91 191 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 M0R3H8 397 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 EIF3DO15371 548 aaKnown RBP eCLIP-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MAFGO15525 162 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RIPK2O43353 540 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRMT3O60678 531 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RFPL2O75678 378 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RHBDL1O75783 438 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HAUS5O94927 633 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SOD2P04179 222 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ADRA2AP08913 450 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HSD3B1P14060 373 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CBR1P16152 277 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRKACGP22612 351 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CTSSP25774 331 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GDI1P31150 447 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SHMT2P34897 504 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PNLIPRP2P54317 469 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GPC5P78333 572 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZNF85Q03923 595 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RBL2Q08999 1139 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MPP2Q14168 576 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TGIF1Q15583 401 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LONRF2Q1L5Z9 754 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TMEM266Q2M3C6 531 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 VWC2Q2TAL6 325 aa-2.36□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms