RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C12orf4Q9NQ89 552 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 BIN3Q9NQY0 253 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 RPL36Q9Y3U8 105 aaKnown RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 TCRBV5S4A2TA0A5A2 114 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 H3BRB1 525 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 KCNN4O15554 427 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CTSEP14091 401 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CLCN3P51790 818 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 PRMT2P55345 433 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 GSTM4Q03013 218 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 DSG2Q14126 1118 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CDKL4Q5MAI5 379 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 FAM171A1Q5VUB5 890 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 FCRLBQ6BAA4 426 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 EBNA1BP2Q99848 306 aaKnown RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 TUT1Q9H6E5 874 aaKnown RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 RIOX1Q9H6W3 641 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 EXO5Q9H790 373 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF275Q9NSD4 429 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 ANKMY1Q9P2S6 941 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 LYVE1Q9Y5Y7 322 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CNTNAP1P78357 1384 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 ANKRD31Q8N7Z5 1873 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CLCA1A8K7I4 914 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 RP2O75695 350 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 IL1RNP18510 177 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CAMK2GQ13555 558 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 PPP1R3AQ16821 1122 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 GOLGA7BQ2TAP0 167 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO33Q7Z6M2 555 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 FUNDC1Q8IVP5 155 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 LGI2Q8N0V4 545 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 OR8H2Q8N162 312 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CRISPLD1Q9H336 500 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 PDGFCQ9NRA1 345 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 PAK1IP1Q9NWT1 392 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 DPP3Q9NY33 737 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 B3GNT2Q9NY97 397 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 POLLQ9UGP5 575 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 INTS1Q8N201 2190 aaKnown RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 COL1A1P02452 1464 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 A0A087WZ62 844 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 SLC12A8A0AV02 714 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CYB561D2O14569 222 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 APOC1P02654 83 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 ITGB1P05556 798 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 MYL9P24844 172 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 SLC7A2P52569 658 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 PPP5CP53041 499 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CBFBQ13951 182 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 OVOS1Q6IE37 1185 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 RETSATQ6NUM9 610 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 PID1Q7Z2X4 250 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CIR1Q86X95 450 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-203ENST00000381196 DDIASQ8IXT1 998 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 SYTL1Q8IYJ3 562 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 FTHL17Q9BXU8 183 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CLIC5Q9NZA1 410 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 CHKBQ9Y259 395 aa4.84□□□□□ -1.63
PTPRD-203ENST00000381196 BRWD1Q9NSI6 2320 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 E2F8A0AVK6 867 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 TBC1D3BA6NDS4 549 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 TMEM221A6NGB7 291 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 PLOD2O00469 737 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 LINGO3P0C6S8 592 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 TPTEP56180 551 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 OR2B6P58173 313 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 IQSEC1Q6DN90 963 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 RPL22L1Q6P5R6 122 aaKnown RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 METTL7BQ6UX53 244 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 LRRN1Q6UXK5 716 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF571Q7Z3V5 609 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 KSR1Q8IVT5 923 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 PRELID2Q8N945 189 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 TRPM4Q8TD43 1214 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 SGCDQ92629 289 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 NELL1Q92832 810 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 SPACA7Q96KW9 195 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 APOL5Q9BWW9 433 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 MKRN2Q9H000 416 aaKnown RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 CAPN10Q9HC96 672 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 KCTD5Q9NXV2 234 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 SIRPGQ9P1W8 387 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 NAALAD2Q9Y3Q0 740 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 DDX60LQ5H9U9 1706 aaKnown RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 A0A1W2PQ67 120 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 SLC28A1O00337 649 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 RASGRP1O95267 797 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 LTA4HP09960 611 aaKnown RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 HSD17B1P14061 328 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 GLRA2P23416 452 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 ABL2P42684 1182 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF143P52747 638 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 CNTN2Q02246 1040 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 SSBP1Q04837 148 aaKnown RBP4.84□□□□□ -1.64
PTPRD-203ENST00000381196 PEX6Q13608 980 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 ATAT1Q5SQI0 421 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 LPCAT3Q6P1A2 487 aa4.84□□□□□ -1.64
PTPRD-203ENST00000381196 TSPAN33Q86UF1 283 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms