RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CBSP35520 551 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 NSG1P42857 185 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 THOP1P52888 689 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 ECT2LQ008S8 904 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 FLOT2Q14254 428 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 TEAD2Q15562 447 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 HABP4Q5JVS0 413 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 PLPP4Q5VZY2 271 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 TMEM25Q86YD3 366 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PDPRQ8NCN5 879 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 RIN3Q8TB24 985 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PYDC1Q8WXC3 89 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 TUBGCP3Q96CW5 907 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 ASIC4Q96FT7 647 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PLEKHG4BQ96PX9 1271 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 FAM126AQ9BYI3 521 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 RIC8BQ9NVN3 520 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 MARK1Q9P0L2 795 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 SUCOQ9UBS9 1254 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 SCN8AQ9UQD0 1980 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 HIDE1A8MVS5 230 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 E2F3O00716 465 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PPP6CO00743 305 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 NRG2O14511 850 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 MOSPD3O75425 235 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 BCAS2O75934 225 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 PRR35P0CG20 571 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 CTSOP43234 321 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 CLNS1AP54105 237 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 TRAP1Q12931 704 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 CEACAM7Q14002 265 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 CHRNA6Q15825 494 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 RBBP7Q16576 425 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PRMT9Q6P2P2 845 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 KIAA0907Q7Z7F0 614 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 SPPL3Q8TCT6 385 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 RPL10LQ96L21 214 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 BBS2Q9BXC9 721 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 SMG9Q9H0W8 520 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 SPHK2Q9NRA0 654 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 SDR39U1Q9NRG7 319 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 SPATS2LQ9NUQ6 558 aaKnown RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 ZDHHC3Q9NYG2 299 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 CXXC1Q9P0U4 656 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 EPS15L1Q9UBC2 864 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 DPP7Q9UHL4 492 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PSMD13Q9UNM6 376 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 CCL26Q9Y258 94 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 OARD1Q9Y530 152 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 PCDHGA7Q9Y5G6 932 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 ATP6AP2A0A1C7CYW4 349 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 SLC9A3R1O14745 358 aaPredicted RBP22.81■■□□□ 1.24
VPS16-201ENST00000380443 MRASO14807 208 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 CASQ2O14958 399 aaPredicted RBP22.81■■□□□ 1.24
VPS16-201ENST00000380443 ATP6AP2O75787 350 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 RHOP08100 348 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 ALDOCP09972 364 aaKnown RBP22.81■■□□□ 1.24
VPS16-201ENST00000380443 GKP32189 559 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 VASPP50552 380 aaPredicted RBP22.81■■□□□ 1.24
VPS16-201ENST00000380443 CCNHP51946 323 aaPredicted RBP22.81■■□□□ 1.24
VPS16-201ENST00000380443 FOXA1P55317 472 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 KIF19Q2TAC6 998 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 SPATS1Q496A3 300 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 TTC23LQ6PF05 361 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 SYVN1Q86TM6 617 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 ZBTB2Q8N680 514 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 POF1BQ8WVV4 589 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 VOPP1Q96AW1 172 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 TUBB1Q9H4B7 451 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 HCFC1R1Q9NWW0 138 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 POLG2Q9UHN1 485 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 CROTQ9UKG9 612 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 BPTFQ12830 3046 aa22.81■■□□□ 1.24
VPS16-201ENST00000380443 A0A0U1RQS6 177 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 FBP2O00757 339 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 PEX1O43933 1283 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 SORBS2O94875 1100 aaKnown RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 SLC25A14O95258 325 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 STK19P49842 368 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 ZNF77Q15935 545 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 XKR7Q5GH72 579 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 CDKL4Q5MAI5 379 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 GPRC6AQ5T6X5 926 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 IRGCQ6NXR0 463 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 SBSNQ6UWP8 590 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 ZSWIM9Q86XI8 627 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 ASB9Q96DX5 294 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 TCEAL4Q96EI5 215 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 HOPXQ9BPY8 73 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 RDH14Q9HBH5 336 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 SPAG4Q9NPE6 437 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 NPIPB15A6NHN6 443 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 NCF1BA6NI72 391 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 IQCF5A8MTL0 148 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 NCF1CA8MVU1 366 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 NEDD8-MDP1E9PL57 170 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 ZNF197O14709 1029 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 TLL1O43897 1013 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms