RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 DENND4AQ7Z401 1863 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 A8MV72 311 aaPredicted RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 UPK1AO00322 258 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 DSCR3O14972 297 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 EIF3DO15371 548 aaKnown RBP eCLIP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 DFNA5O60443 496 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 TRIM16O95361 564 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 AMHP03971 560 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 C2P06681 752 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 GFAPP14136 432 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 ZP3P21754 424 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 GMPRP36959 345 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SEPHS1P49903 392 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CSRP3P50461 194 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 PCBP1Q15365 356 aaKnown RBP eCLIP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 LCN8Q6JVE9 175 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 NAPRTQ6XQN6 538 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 ENOSF1Q7L5Y1 443 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CCDC190Q86UF4 302 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 AMIGO1Q86WK6 493 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 UNC5BQ8IZJ1 945 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 C9orf62Q8N4C0 152 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 FAM71DQ8N9W8 422 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 OR8K3Q8NH51 312 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SETD7Q8WTS6 366 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 TMCO6Q96DC7 493 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 KREMEN1Q96MU8 473 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 PHOX2BQ99453 314 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SLC35C2Q9NQQ7 365 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 DDX28Q9NUL7 540 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SLC9A2Q9UBY0 812 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 COPS3Q9UNS2 423 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 MRPS23Q9Y3D9 190 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 QSER1Q2KHR3 1735 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SIP14410 1827 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 ANKRD31Q8N7Z5 1873 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 hCG_1818297A0A087WSY0 165 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 PQLC2LA1A4F0 135 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MEIOCA2RUB1 952 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 AQP12BA6NM10 295 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CLDN24A6NM45 220 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ZNF99A8MXY4 864 aaPredicted RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 KHNYNO15037 678 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 GATCO43716 136 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ALBP02768 609 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ALDOAP04075 364 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 IL1R2P27930 398 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MAGEA6P43360 314 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CLK2P49760 499 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 RPL10AP62906 217 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CDH17Q12864 832 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 STXBP2Q15833 593 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ALFQ53S48 1182 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 FAM102AQ5T9C2 384 aaPredicted RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 KIF18BQ86Y91 864 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 BBS7Q8IWZ6 715 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 AQP12AQ8IXF9 295 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 RDH10Q8IZV5 341 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 TMEM199Q8N511 208 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CERS5Q8N5B7 392 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 DHRSXQ8N5I4 330 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MCPH1Q8NEM0 835 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 PPWD1Q96BP3 646 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 RBM18Q96H35 190 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MUS81Q96NY9 551 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MCEEQ96PE7 176 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 NEDD4LQ96PU5 975 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 REG4Q9BYZ8 158 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 LDAHQ9H6V9 325 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 LRRC4Q9HBW1 653 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MRPL40Q9NQ50 206 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ZNF302Q9NR11 478 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CYB5R1Q9UHQ9 305 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 STON1Q9Y6Q2 735 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 LAMA2P24043 3122 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 H0YCG3 227 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 KPNA5O15131 536 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 TSPAN12O95859 305 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 FTH1P02794 183 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CPB1P15086 417 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 HLA-DMAP28067 261 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 GTF2E2P29084 291 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 RPS9P46781 194 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 CLCNKAP51800 687 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ATXN3P54252 364 aaPredicted RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 PER3P56645 1201 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 PSME3P61289 254 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 VBP1P61758 197 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 FOXK2Q01167 660 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ELOAQ14241 798 aaKnown RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ZMYND11Q15326 602 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 TBPL2Q6SJ96 375 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 HHIPL2Q6UWX4 724 aa6.51□□□□□ -1.37
RIPK1-202ENST00000380409 ZNF517Q6ZMY9 492 aaPredicted RBP6.51□□□□□ -1.37
RIPK1-202ENST00000380409 MON1BQ7L1V2 547 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms