RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 hCG_1818297A0A087WSY0 165 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 LOC101059948A0A1B0GTJ6 334 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 KATNA1O75449 491 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 PRAMEF1O95521 474 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 CTSBP07858 339 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 ITGB6P18564 788 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 HSPA9P38646 679 aaKnown RBP4.59□□□□□ -1.67
C9orf72-203ENST00000380003 LIMK2P53671 638 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 CRADDP78560 199 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 SNX1Q13596 522 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 PLCL1Q15111 1095 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 SLC1A5Q15758 541 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 SKIDA1Q1XH10 827 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 PPP1R2P3Q6NXS1 205 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 TMEM220Q6QAJ8 160 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 ADAMTSL4Q6UY14 1074 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 C11orf96Q7Z7L8 435 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 CNGA4Q8IV77 575 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 TRIM48Q8IWZ4 208 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 GLIS1Q8NBF1 620 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 LIN37Q96GY3 246 aaPredicted RBP4.59□□□□□ -1.67
C9orf72-203ENST00000380003 ZNF778Q96MU6 729 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 SLC25A51Q9H1U9 297 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 XKR8Q9H6D3 395 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 PKD2L2Q9NZM6 624 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 NCKIPSDQ9NZQ3 722 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 OGFRQ9NZT2 677 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 RCOR3Q9P2K3 495 aaPredicted RBP4.59□□□□□ -1.67
C9orf72-203ENST00000380003 PPIL1Q9Y3C6 166 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 PCDHB11Q9Y5F2 797 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 EPN1Q9Y6I3 576 aaPredicted RBP4.59□□□□□ -1.67
C9orf72-203ENST00000380003 CAPN6Q9Y6Q1 641 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 VPS13CQ709C8 3753 aa4.59□□□□□ -1.67
C9orf72-203ENST00000380003 IGHV5-51A0A0C4DH38 117 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 CXorf51AA0A1B0GTR3 108 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 CCDC66A2RUB6 948 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 GOLGA8KD6RF30 607 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 GOLGA8TH3BQL2 631 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 GAPDHSO14556 408 aaPredicted RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 PPP1R12AO14974 1030 aaPredicted RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 CBFA2T2O43439 604 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 POP7O75817 140 aaKnown RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 NDUFA10O95299 355 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 METTL18O95568 372 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 VIPP01282 170 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 RBP3P10745 1247 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 THRAP10827 490 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 PVRP15151 417 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 PDHA2P29803 388 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 CCKBRP32239 447 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 CXCR5P32302 372 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 PREPP48147 710 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 SUOXP51687 545 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 SRSF11Q05519 484 aaKnown RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 SLC9A5Q14940 896 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 SPA17Q15506 151 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 GPRC6AQ5T6X5 926 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 ALG1LQ6GMV1 187 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 TMC3Q7Z5M5 1100 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 RHOT2Q8IXI1 618 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 CFAP206Q8IYR0 622 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 NDUFAF2Q8N183 169 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 SLC38A9Q8NBW4 561 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 GALNT6Q8NCL4 622 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 OR4E2Q8NGC2 313 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 RTP4Q96DX8 246 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 TMEM74Q96NL1 305 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 UBL7Q96S82 380 aaPredicted RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 TRIM56Q9BRZ2 755 aaKnown RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 ULBP3Q9BZM4 244 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 TRIM39Q9HCM9 518 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 EVA1BQ9NVM1 165 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 IL1RAPL1Q9NZN1 696 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 PILRAQ9UKJ1 303 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 RUVBL2Q9Y230 463 aaKnown RBP4.59□□□□□ -1.68
C9orf72-203ENST00000380003 KLHL20Q9Y2M5 609 aa4.59□□□□□ -1.68
C9orf72-203ENST00000380003 A6NCN8 305 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 IQCF5A8MTL0 148 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 STMND1H3BQB6 276 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 POLR1CO15160 346 aaPredicted RBP4.58□□□□□ -1.68
C9orf72-203ENST00000380003 NVLO15381 856 aaKnown RBP4.58□□□□□ -1.68
C9orf72-203ENST00000380003 HCRTR1O43613 425 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 STK17BO94768 372 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 UBXN7O94888 489 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 IFNB1P01574 187 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 IVLP07476 585 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 ZSCAN5DPP0CG00 497 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 LIPCP11150 499 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 FOLR1P15328 257 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 ZNF30P17039 623 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 ZNF75DP51815 510 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 MLLT10P55197 1068 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 EIF3EP60228 445 aaKnown RBP4.58□□□□□ -1.68
C9orf72-203ENST00000380003 IFI35P80217 286 aaPredicted RBP4.58□□□□□ -1.68
C9orf72-203ENST00000380003 SEPT6Q14141 434 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 PRKD1Q15139 912 aaPredicted RBP4.58□□□□□ -1.68
C9orf72-203ENST00000380003 DEFB109BQ30KR1 87 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 ZNF569Q5MCW4 686 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 TMEM164Q5U3C3 297 aa4.58□□□□□ -1.68
C9orf72-203ENST00000380003 HIST2H2BCQ6DN03 193 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms