RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 GTF2H3Q13889 308 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 PCLAFQ15004 111 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 SEL1L3Q68CR1 1132 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 TBC1D3GQ6DHY5 549 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 TBC1D3CQ6IPX1 549 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 PNCKQ6P2M8 343 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 TBC1D3Q8IZP1 549 aaPredicted RBP24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 HMGB4Q8WW32 186 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 ZNF514Q96K75 400 aaPredicted RBP24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 BTBD1Q9H0C5 482 aa24.24■■□□□ 1.47
ECHDC3-201ENST00000379215 IQCF5A8MTL0 148 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 TK2O00142 265 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 VEGFDO43915 354 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 IGLV3-19P01714 112 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 TPMTP51580 245 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 TSTD1Q8NFU3 115 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 GIMAP7Q8NHV1 300 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 CCDC97Q96F63 343 aaPredicted RBP24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 HIC2Q96JB3 615 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 SLC17A9Q9BYT1 436 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 ITM2CQ9NQX7 267 aa24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 USP36Q9P275 1121 aaKnown RBP24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 CNOT6Q9ULM6 557 aaKnown RBP24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 ZFR2Q9UPR6 939 aaKnown RBP24.23■■□□□ 1.47
ECHDC3-201ENST00000379215 INPP4BO15327 924 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 FAM107AO95990 144 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 GSTM1P09488 218 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 ENO3P13929 434 aaPredicted RBP24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 GRK2P25098 689 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 ALDH3A1P30838 453 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 GSTM4Q03013 218 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 TMEM115Q12893 351 aaPredicted RBP24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 TRIM69Q86WT6 500 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 CPNE9Q8IYJ1 553 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 PGBD3Q8N328 593 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 SPATA6LQ8N4H0 392 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 OR2T34Q8NGX1 318 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 STAG3L4Q8TBR4 150 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 KIAA1191Q96A73 305 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 LINGO1Q96FE5 620 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 TBC1D17Q9HA65 648 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 TRIM39Q9HCM9 518 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 CPSF2Q9P2I0 782 aaKnown RBP24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 PLXNB3Q9ULL4 1909 aa24.22■■□□□ 1.47
ECHDC3-201ENST00000379215 TARM1B6A8C7 271 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 G3V2L1 256 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 BGNP21810 368 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 OXTRP30559 389 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 SEC24CP53992 1094 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 CHI3L2Q15782 390 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 WSCD2Q2TBF2 565 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 TRIM67Q6ZTA4 783 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 CPLX4Q7Z7G2 160 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 ISCA2Q86U28 154 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 TMEM151AQ8N4L1 468 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 FLCNQ8NFG4 579 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 IER2Q9BTL4 223 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 MECRQ9BV79 373 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 SYCE1LA8MT33 242 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 K7ESM1 405 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 MTX2O75431 263 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 PCCBP05166 539 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 ATP5F1P24539 256 aaPredicted RBP24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 PRLHRP49683 370 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 FZD5Q13467 585 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 BCL7AQ4VC05 210 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 PLEKHS1Q5SXH7 462 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 SLC22A9Q8IVM8 553 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 C10orf107Q8IVU9 208 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 MYO1HQ8N1T3 1032 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 DENND6BQ8NEG7 585 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 COX14Q96I36 57 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 SLC30A3Q99726 388 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 FOXQ1Q9C009 403 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 ALG9Q9H6U8 611 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 OXSMQ9NWU1 459 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 GALPQ9UBC7 116 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 TMCO1Q9UM00 188 aa24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 MTF2Q9Y483 593 aaPredicted RBP24.21■■□□□ 1.47
ECHDC3-201ENST00000379215 PRUNE2Q8WUY3 3088 aa24.2■■□□□ 1.47
ECHDC3-201ENST00000379215 GPR89AB7ZAQ6 455 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 ZBTB14O43829 449 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 TRIM13O60858 407 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 KERAO60938 352 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 TSPAN12O95859 305 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 SERPINE1P05121 402 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 GPR89BP0CG08 455 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 KCNA4P22459 653 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 LIPMQ5VYY2 423 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 DET1Q7L5Y6 550 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 LRRC34Q8IZ02 419 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 RASGEF1AQ8N9B8 481 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 TP53I13Q8NBR0 393 aaPredicted RBP24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 LKAAEAR1Q8TD35 194 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 BCAS4Q8TDM0 211 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 GRAMD1AQ96CP6 724 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 SGF29Q96ES7 293 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 FAM126AQ9BYI3 521 aaPredicted RBP24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 WDR26Q9H7D7 661 aa24.2■■□□□ 1.46
ECHDC3-201ENST00000379215 ATG2BQ96BY7 2078 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms