RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 FBXW8Q8N3Y1 598 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 WFIKKN2Q8TEU8 576 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 KCNJ9Q92806 393 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 SPATA16Q9BXB7 569 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 ELOVL2Q9NXB9 296 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 MATN2O00339 956 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 ASLP04424 464 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 LHCGRP22888 699 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 PTPN5P54829 565 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 MESP2Q0VG99 397 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 PDCD2Q16342 344 aaPredicted RBP19.21■□□□□ 0.67
SSU72-204ENST00000378726 SLC9B1Q4ZJI4 515 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 ETFBKMTQ8IXQ9 262 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 STAG3L4Q8TBR4 150 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 JADE3Q92613 823 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 MRPL38Q96DV4 380 aaKnown RBP19.21■□□□□ 0.67
SSU72-204ENST00000378726 FAM83CQ9BQN1 747 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 SARS2Q9NP81 518 aaKnown RBP19.21■□□□□ 0.67
SSU72-204ENST00000378726 B4GALT6Q9UBX8 382 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 PCDHB1Q9Y5F3 818 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 E9PBE3 544 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 H3BNX3 289 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 KLHL41O60662 606 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 COX4I1P13073 169 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 HNRNPLP14866 589 aaKnown RBP eCLIP19.21■□□□□ 0.67
SSU72-204ENST00000378726 SERPINB5P36952 375 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 ATP6V0D1P61421 351 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 ST8SIA6P61647 398 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 MED21Q13503 144 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 GPR33Q49SQ1 333 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 TANGO2Q6ICL3 276 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 BRAT1Q6PJG6 821 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 ZNF366Q8N895 744 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 MAPK15Q8TD08 544 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 CD200R1Q8TD46 325 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 EXT2Q93063 718 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 KIAA1191Q96A73 305 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 CCDC97Q96F63 343 aaPredicted RBP19.21■□□□□ 0.67
SSU72-204ENST00000378726 CCDC28BQ9BUN5 200 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 BOCQ9BWV1 1114 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 CLPBQ9H078 707 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 THG1LQ9NWX6 298 aaKnown RBP19.21■□□□□ 0.67
SSU72-204ENST00000378726 DEC1Q9P2X7 70 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 CRLS1Q9UJA2 301 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 MYO9BQ13459 2157 aa19.21■□□□□ 0.67
SSU72-204ENST00000378726 TRBV5-4A0A0C4DH59 114 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 HDAC3O15379 428 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 LINC01565O15544 149 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 VCLP18206 1134 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 GRIA2P42262 883 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 VASPP50552 380 aaPredicted RBP19.2■□□□□ 0.66
SSU72-204ENST00000378726 IL2P60568 153 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 TRIP10Q15642 601 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 PTRHD1Q6GMV3 140 aaKnown RBP19.2■□□□□ 0.66
SSU72-204ENST00000378726 UGT3A1Q6NUS8 523 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 ST13P4Q8IZP2 240 aaPredicted RBP19.2■□□□□ 0.66
SSU72-204ENST00000378726 RBFAQ8N0V3 343 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 PBXIP1Q96AQ6 731 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 ATOH8Q96SQ7 321 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 TRPV4Q9HBA0 871 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 IL36AQ9UHA7 158 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 PRRT4C9JH25 899 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 UBXN8O00124 270 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 GRID2O43424 1007 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 ACRV1P26436 265 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 HK2P52789 917 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 KLF10Q13118 480 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 LYPLAL1Q5VWZ2 237 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 SEL1L3Q68CR1 1132 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 RFLNAQ6ZTI6 216 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 RPS27LQ71UM5 84 aaKnown RBP19.2■□□□□ 0.66
SSU72-204ENST00000378726 NAT14Q8WUY8 206 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 EEF1AKMT1Q8WVE0 214 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 GDF15Q99988 308 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 VCX3BQ9H321 246 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 OBP2AQ9NY56 170 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 PACSIN3Q9UKS6 424 aa19.2■□□□□ 0.66
SSU72-204ENST00000378726 C2orf16Q68DN1 1984 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 SLCO1B7G3V0H7 640 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 CTSLP07711 333 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 MTHFD2P13995 350 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 RPS3P23396 243 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSU72-204ENST00000378726 CLCN7P51798 805 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 ZNF678Q5SXM1 525 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 TMEM184AQ6ZMB5 413 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 CLDN19Q8N6F1 224 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 KDM1BQ8NB78 822 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 NUP210Q8TEM1 1887 aaPredicted RBP19.19■□□□□ 0.66
SSU72-204ENST00000378726 NXPE3Q969Y0 559 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 CENPKQ9BS16 269 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 EML4Q9HC35 981 aaKnown RBP19.19■□□□□ 0.66
SSU72-204ENST00000378726 ZFP14Q9HCL3 533 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 VTI1BQ9UEU0 232 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 IKZF3Q9UKT9 509 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 RNF112Q9ULX5 631 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 DHRS7Q9Y394 339 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 ATG2AQ2TAZ0 1938 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 CDC7O00311 574 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 SUPT7LO94864 414 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms