RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 LYVE1Q9Y5Y7 322 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 BCL9LQ86UU0 1499 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 CSF2P04141 144 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 SLC2A3P11169 496 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 TKTL1P51854 596 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 GBX2P52951 348 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 DDR2Q16832 855 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 WSCD2Q2TBF2 565 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 RHOUQ7L0Q8 258 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 TRIB2Q92519 343 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 SHC3Q92529 594 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 SERAC1Q96JX3 654 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 NDUFAF1Q9Y375 327 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PRAMEF33A0A0G2JMD5 474 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PRAMEF10O60809 474 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PSMD10O75832 226 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 MBP02144 154 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 C7P10643 843 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 CSKP41240 450 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 RPL6Q02878 288 aaKnown RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ANGEL2Q5VTE6 544 aaKnown RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 SERPINB11Q96P15 392 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 HSD17B14Q9BPX1 270 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ABCG8Q9H221 673 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 IGSF5Q9NSI5 407 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ATP8B3O60423 1300 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ERVH48-1M5A8F1 160 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 IL1BP01584 269 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 SNHG28P0DPA3 235 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ELK4P28324 431 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 CPOXP36551 454 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ACOX1Q15067 660 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF574Q6ZN55 896 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PID1Q7Z2X4 250 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 C12orf45Q8N5I9 185 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 GLB1L3Q8NCI6 653 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 FAM45AQ8TCE6 357 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 CCDC32Q9BV29 185 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 MUC3BQ9H195 1237 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 ARNT2Q9HBZ2 717 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PRSS51A0A1B0GVH4 220 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 AGAP5A6NIR3 686 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 E9PAM4 449 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 M0R233 179 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 PAMP19021 973 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 HTR3AP46098 478 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 KCNC4Q03721 635 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 KCNJ11Q14654 390 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 KYAT1Q16773 422 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 NIPA1Q7RTP0 329 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 BTLAQ7Z6A9 289 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 TFAP2DQ7Z6R9 452 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 REM2Q8IYK8 340 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-202ENST00000378161 EID3Q8N140 333 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 MORF4L1Q9UBU8 362 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 EGFL7Q9UHF1 273 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 RNF112Q9ULX5 631 aa11.67□□□□□ -0.54
NPHP4-202ENST00000378161 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 M0R2N6 131 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 FPGTO14772 594 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 PLA2G6O60733 806 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF26P17031 533 aaPredicted RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 GPD1P21695 349 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 RPL14P50914 215 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ACLYP53396 1101 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 MRPS5P82675 430 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 RGS1Q08116 209 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 LEXMQ3ZCV2 418 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 RHBDF2Q6PJF5 856 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 TMEM151BQ8IW70 566 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ADGRF2Q8IZF7 708 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 BSNDQ8WZ55 320 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 PIP5K1AQ99755 562 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 AKIP1Q9NQ31 210 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 CROCCQ5TZA2 2017 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 SSNA1O43805 119 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 C9P02748 559 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 IL6P05231 212 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ZDHHC11BP0C7U3 371 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 EIF2DP41214 584 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 RPS5P46782 204 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 RAB2AP61019 212 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms