RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ADRA1AP35348 466 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 AGTR2P50052 363 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ISL1P61371 349 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 EMX2Q04743 252 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 NPTX1Q15818 432 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ATP6AP1LQ52LC2 224 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 INTS6LQ5JSJ4 861 aaKnown RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 RANBP10Q6VN20 620 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 TMEM179BQ7Z7N9 219 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 FAM83FQ8NEG4 500 aaPredicted RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 DPF3Q92784 378 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 BTN2A3PQ96KV6 586 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 DHRS1Q96LJ7 313 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 SLC9A7Q96T83 725 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 DSN1Q9H410 356 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 TMEM30AQ9NV96 361 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 FBXO10Q9UK96 956 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 FAM50BQ9Y247 325 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 MYLKQ15746 1914 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 KCNK2O95069 426 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 MTHFD2P13995 350 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 TRPC1P48995 793 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 RAPSNQ13702 412 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 ZBTB6Q15916 424 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 CRY1Q16526 586 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 RSBN1Q5VWQ0 802 aaPredicted RBP15.71■□□□□ 0.1
CKAP4-201ENST00000378026 HID1Q8IV36 788 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 MMAAQ8IVH4 418 aaKnown RBP15.71■□□□□ 0.1
CKAP4-201ENST00000378026 OR2T11Q8NH01 316 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 MCFD2Q8NI22 146 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 CDK15Q96Q40 435 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 OSBPL10Q9BXB5 764 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 SPATC1LQ9H0A9 340 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 AIG1Q9NVV5 245 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 COMMD8Q9NX08 183 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 MAGEL2Q9UJ55 1249 aa15.71■□□□□ 0.1
CKAP4-201ENST00000378026 PARP14Q460N5 1801 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 TTC34A8MYJ7 566 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 NUAK1O60285 661 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 RFPL2O75678 378 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 S1PR4O95977 384 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 GSNP06396 782 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 PRSS56P0CW18 603 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 HCAR3P49019 387 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 TAF6P49848 677 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 NRG1Q02297 640 aaPredicted RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 RBBP7Q16576 425 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 KIAA0319Q5VV43 1072 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 LBX2Q6XYB7 198 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 SPATC1Q76KD6 591 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 SYTL1Q8IYJ3 562 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 PIK3C3Q8NEB9 887 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 TBATAQ96M53 351 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 THUMPD3Q9BV44 507 aaKnown RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 NEK6Q9HC98 313 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 MPP6Q9NZW5 540 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 ADGRE2Q9UHX3 823 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 TSR3Q9UJK0 312 aaKnown RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 THSD7AQ9UPZ6 1657 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 MAFKO60675 156 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 MOCS2O96007 188 aaPredicted RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 PIRTP0C851 137 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 NEK2P51955 445 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 SCAPQ12770 1279 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 SMN1Q16637 294 aaKnown RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 USP43Q70EL4 1123 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 BEND5Q7L4P6 421 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 ARMCX6Q7L4S7 300 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 DYNC2LI1Q8TCX1 351 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 KLHL5Q96PQ7 755 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 GAD1Q99259 594 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 NT5MQ9NPB1 228 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 IL37Q9NZH6 218 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 INTS6Q9UL03 887 aaKnown RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 CAB39Q9Y376 341 aaPredicted RBP15.7■□□□□ 0.1
CKAP4-201ENST00000378026 GJA3Q9Y6H8 435 aa15.7■□□□□ 0.1
CKAP4-201ENST00000378026 CEP350Q5VT06 3117 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 SMIM28A0A1B0GU29 152 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 FAM92AA1XBS5 289 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PRMT5O14744 637 aaPredicted RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 RAD51BO15315 384 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 APBA3O96018 575 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 LGALS2P05162 132 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 ENO2P09104 434 aaPredicted RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 CCNCP24863 283 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 CD86P42081 329 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 CDK5R2Q13319 367 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 DESI1Q6ICB0 168 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 LYSMD2Q8IV50 215 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 ARHGAP12Q8IWW6 846 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 FAM126BQ8IXS8 530 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 FBXO39Q8N4B4 442 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 OR10A6Q8NH74 314 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 FBXO8Q9NRD0 319 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 RNF112Q9ULX5 631 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms