RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TRAF2Q12933 501 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TGFBIQ15582 683 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 C6orf136Q5SQH8 315 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 LETMD1Q6P1Q0 360 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 BLOC1S3Q6QNY0 202 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 GCNT7Q6ZNI0 430 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 LINC01599Q8WXQ3 324 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP11-204ENST00000377107 SDCCAG3Q96C92 435 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ZNF597Q96LX8 424 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TLR9Q9NR96 1032 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 MRGBPQ9NV56 204 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 A0A1W2PP18 115 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 LCHNA4D1U4 455 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 UPK3BL1B0FP48 263 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 UPK3BL2E5RIL1 263 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 PTGES3LE9PB15 166 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 H3BNH8 94 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 KLKB1P03952 638 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 EFNA1P20827 205 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 ACADVLP49748 655 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ERVPABLB-1P60509 514 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 SMAD3P84022 425 aaKnown RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 DDX39BQ13838 428 aaKnown RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 OR10A6Q8NH74 314 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 RAET1EQ8TD07 263 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 AURKBQ96GD4 344 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 CCDC138Q96M89 665 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ASB2Q96Q27 587 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 FARSBQ9NSD9 589 aaKnown RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 CCM2LQ9NUG4 571 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 GALNT8Q9NY28 637 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TRPM5Q9NZQ8 1165 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 KRT87PA6NCN2 255 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 FXYD1O00168 92 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 COCHO43405 550 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 ESRRBO95718 433 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 UROSP10746 265 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TTPAP49638 278 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 HK3P52790 923 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ATP6V0D1P61421 351 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 SELPLGQ14242 412 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 KANK2Q63ZY3 851 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 BEND5Q7L4P6 421 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ZNF683Q8IZ20 524 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 HS3ST5Q8IZT8 346 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 OR4F6Q8NGB9 312 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 FAM162AQ96A26 154 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 BIRC7Q96CA5 298 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 HSPBAP1Q96EW2 488 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ASIC4Q96FT7 647 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 CENPNQ96H22 339 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 ZBTB18Q99592 522 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 SDR39U1Q9NRG7 319 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 PKD2L2Q9NZM6 624 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 BBIP1A8MTZ0 92 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 WASH4PA8MWX3 477 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.36
USP11-204ENST00000377107 OGNP20774 298 aaKnown RBP12.77□□□□□ -0.36
USP11-204ENST00000377107 MAPKAPK2P49137 400 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 PIGFQ07326 219 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 LAPTM4AQ15012 233 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 KIAA2013Q8IYS2 634 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 MAGEH1Q9H213 219 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.36
USP11-204ENST00000377107 TDRKHQ9Y2W6 561 aaKnown RBP12.77□□□□□ -0.36
USP11-204ENST00000377107 ZNF711Q9Y462 761 aa12.77□□□□□ -0.36
USP11-204ENST00000377107 PABPN1LA6NDY0 278 aaKnown RBP12.77□□□□□ -0.37
USP11-204ENST00000377107 PRAMEF1O95521 474 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 MLYCDO95822 493 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 ATF6P18850 670 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 PRKACGP22612 351 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 ELK4P28324 431 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 RPS9P46781 194 aaKnown RBP12.77□□□□□ -0.37
USP11-204ENST00000377107 INHBEP58166 350 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 CHRNB3Q05901 458 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 TAF1AQ15573 450 aaPredicted RBP12.77□□□□□ -0.37
USP11-204ENST00000377107 RFTN2Q52LD8 501 aaPredicted RBP12.77□□□□□ -0.37
USP11-204ENST00000377107 PRMT9Q6P2P2 845 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 EPHX4Q8IUS5 362 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 PHACTR4Q8IZ21 702 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 TRPV3Q8NET8 790 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 PYCR2Q96C36 320 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 PSKH2Q96QS6 385 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 DERL2Q9GZP9 239 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
USP11-204ENST00000377107 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
USP11-204ENST00000377107 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 PCTPQ9UKL6 214 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 SQORQ9Y6N5 450 aa12.77□□□□□ -0.37
USP11-204ENST00000377107 A0A087WXM4 84 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TFPTP0C1Z6 253 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms