RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 B4DGG1 531 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 RNF225M0QZC1 329 aaPredicted RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 ZBTB22O15209 634 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 VNN1O95497 513 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 ATP1A4Q13733 1029 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 SUSD3Q96L08 255 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 EBPLQ9BY08 206 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 WRAP73Q9P2S5 460 aaPredicted RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 MTRRQ9UBK8 725 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 LRCH1Q9Y2L9 728 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 MYOM1P52179 1685 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 PNMA8CA0A1B0GUJ8 204 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 MFN2O95140 757 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 IL12BP29460 328 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 HNRNPDQ14103 355 aaKnown RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 CLEC6AQ6EIG7 209 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 RTL4Q6ZR62 310 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 PTCHD4Q6ZW05 846 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 CTU1Q7Z7A3 348 aaKnown RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 OR2T12Q8NG77 320 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 BRSK1Q8TDC3 778 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 RBM18Q96H35 190 aaKnown RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 ZNF184Q99676 751 aaPredicted RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 TRIM8Q9BZR9 551 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 TXNRD2Q9NNW7 524 aa13.5□□□□□ -0.25
GPC6-201ENST00000377047 MRPS7Q9Y2R9 242 aaKnown RBP13.5□□□□□ -0.25
GPC6-201ENST00000377047 RCVRNP35243 200 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 SLC13A2Q13183 592 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CCDC92Q53HC0 331 aaPredicted RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 MBLAC2Q68D91 279 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 TRPS1Q9UHF7 1281 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 PLLPQ9Y342 182 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 SAGP10523 405 aaPredicted RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 ADSSP30520 456 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 APLP1P51693 650 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 HSPB3Q12988 150 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 GRB14Q14449 540 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 RFTN2Q52LD8 501 aaPredicted RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 GCNT6Q5T4J0 391 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 AMIGO2Q86SJ2 522 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 GTPBP2Q9BX10 602 aaKnown RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 RBM7Q9Y580 266 aaKnown RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 CPED1A4D0V7 1026 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 INPPL1O15357 1258 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CLCQ05315 142 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 SH3PXD2AQ5TCZ1 1133 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 KLHL24Q6TFL4 600 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 PEX5LQ8IYB4 626 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 EPB41L1Q9H4G0 881 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CCSER2Q9H7U1 834 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 DNAJC28Q9NX36 388 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 STON1Q9Y6Q2 735 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 FSTL1Q12841 308 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 ACAP2Q15057 778 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 ANKRD22Q5VYY1 191 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 TXNDC8Q6A555 127 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 AMZ2Q86W34 360 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CPNE9Q8IYJ1 553 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CELF5Q8N6W0 485 aaKnown RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 LEMD2Q8NC56 503 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CYP2S1Q96SQ9 504 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 PAIP1Q9H074 479 aaKnown RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 CARS2Q9HA77 564 aaKnown RBP13.49□□□□□ -0.25
GPC6-201ENST00000377047 BBIP1A8MTZ0 92 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 XKRYO14609 159 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 C8GP07360 202 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 DDX6P26196 483 aaKnown RBP eCLIP13.49□□□□□ -0.25
GPC6-201ENST00000377047 NSG1P42857 185 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 PGDP52209 483 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 TMC8Q8IU68 726 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 KIFC1Q9BW19 673 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 WDR26Q9H7D7 661 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 PNPLA8Q9NP80 782 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 EHD3Q9NZN3 535 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 PIK3C2AO00443 1686 aa13.49□□□□□ -0.25
GPC6-201ENST00000377047 CHRNB2P17787 502 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 VARSP26640 1264 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 SULT1C3Q6IMI6 304 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 ZYG11AQ6WRX3 759 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 CPSF7Q8N684 471 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 SHDQ96IW2 340 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 PPM1MQ96MI6 270 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 HAPLN3Q96S86 360 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 UNC93B1Q9H1C4 597 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 KCND1Q9NSA2 647 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 SAMD4AQ9UPU9 718 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 ATRNL1Q5VV63 1379 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 B3GALT2O43825 422 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 NRP2O60462 931 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 UNC5CO95185 931 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 LAMP2P13473 410 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 MYL9P24844 172 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 PSMD4P55036 377 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 FAM91A1Q658Y4 838 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms