RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DMPKQ09013 629 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 TMEM115Q12893 351 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-204ENST00000376643 MPP3Q13368 585 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 SEPT7Q16181 437 aaKnown RBP14.5□□□□□ -0.09
HDAC6-204ENST00000376643 PPP2R5EQ16537 467 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 LONRF2Q1L5Z9 754 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 PLA2G4EQ3MJ16 856 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC6-204ENST00000376643 TFDP3Q5H9I0 405 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 GLT6D1Q7Z4J2 308 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 AMZ2Q86W34 360 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 PPP1R3BQ86XI6 285 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 KMT5CQ86Y97 462 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 RASGRP3Q8IV61 690 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 VSTM4Q8IW00 320 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 RBM41Q96IZ5 413 aaKnown RBP14.5□□□□□ -0.09
HDAC6-204ENST00000376643 CALR3Q96L12 384 aaKnown RBP14.5□□□□□ -0.09
HDAC6-204ENST00000376643 PPP1R2P1Q96PQ5 205 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 CD180Q99467 661 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 PDE7BQ9NP56 450 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 TRHDEQ9UKU6 1024 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 RPS6KL1Q9Y6S9 549 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 TLN1Q9Y490 2541 aaKnown RBP14.49□□□□□ -0.09
HDAC6-204ENST00000376643 GLYATL1P3A0A0U1RQE8 302 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 LOC101059948A0A1B0GTJ6 334 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 LOC285095A0A1B0GVY8 99 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 CST8O60676 142 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 ZRANB2O95218 330 aaKnown RBP eCLIP14.49□□□□□ -0.09
HDAC6-204ENST00000376643 NDUFA10O95299 355 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 RECKO95980 971 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 PRKAR1AP10644 381 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 TYRP1P17643 537 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 COMTP21964 271 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 CDKN2BP42772 138 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 HADHBP55084 474 aaKnown RBP14.49□□□□□ -0.09
HDAC6-204ENST00000376643 GFERP55789 205 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 WNT3AP56704 352 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 ACY1Q03154 408 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 CACHD1Q5VU97 1274 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 NPNTQ6UXI9 565 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 CARFQ8N187 725 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 SPATA22Q8NHS9 363 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 ZFPM2Q8WW38 1151 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 OR6C1Q96RD1 312 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 FCRL5Q96RD9 977 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 APMAPQ9HDC9 416 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 ARFGAP3Q9NP61 516 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 SPTLC3Q9NUV7 552 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 SMOXQ9NWM0 555 aa14.49□□□□□ -0.09
HDAC6-204ENST00000376643 ZNF624Q9P2J8 865 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-204ENST00000376643 GOLGA6L3A6NEY3 463 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 PRR19A6NJB7 356 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 C21orf140B9A014 251 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 AKR1B15C9JRZ8 316 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-204ENST00000376643 MKRN2OSH3BPM6 223 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 NKX2-8O15522 239 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 MTX2O75431 263 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 ANXA9O76027 345 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 FGF5P12034 268 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 TNNT1P13805 278 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 RPL10P27635 214 aaKnown RBP14.48□□□□□ -0.09
HDAC6-204ENST00000376643 DLSTP36957 453 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 CASRP41180 1078 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 ARL4DP49703 201 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 PDE1BQ01064 536 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 TLE1Q04724 770 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 GPR18Q14330 331 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 PLCL1Q15111 1095 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 TAZQ16635 292 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 ATP13A5Q4VNC0 1218 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 LACTB2Q53H82 288 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-204ENST00000376643 ZNF648Q5T619 568 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-204ENST00000376643 ITPRIPL1Q6GPH6 555 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 IRGCQ6NXR0 463 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 MFSD7Q6UXD7 560 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 SPOCD1Q6ZMY3 1216 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 PID1Q7Z2X4 250 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 ZNF547Q8IVP9 402 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 RCOR2Q8IZ40 523 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 DDHD1Q8NEL9 900 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 KLHL6Q8WZ60 621 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 TRIM4Q9C037 500 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 OGFRQ9NZT2 677 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 SCHIP1Q9P0W5 487 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-204ENST00000376643 SLC23A2Q9UGH3 650 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 RARRES3Q9UL19 164 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 POLHQ9Y253 713 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 MYO18BQ8IUG5 2567 aa14.48□□□□□ -0.09
HDAC6-204ENST00000376643 SETXQ7Z333 2677 aaKnown RBP14.48□□□□□ -0.09
HDAC6-204ENST00000376643 STK10O94804 968 aaKnown RBP14.47□□□□□ -0.09
HDAC6-204ENST00000376643 RALBP11234 206 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 NELFEP18615 380 aaKnown RBP14.47□□□□□ -0.09
HDAC6-204ENST00000376643 NFKB1P19838 968 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 FECHP22830 423 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 SEPHS1P49903 392 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 GEMP55040 296 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 NFKB2Q00653 900 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 XRCC4Q13426 336 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 SLC1A5Q15758 541 aa14.47□□□□□ -0.09
HDAC6-204ENST00000376643 DEFB109BQ30KR1 87 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms