RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RNFT2Q96EX2 444 aa16.65■□□□□ 0.26
VARS-215ENST00000375663 FKBPLQ9UIM3 349 aa16.65■□□□□ 0.26
VARS-215ENST00000375663 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
VARS-215ENST00000375663 ARL5CA6NH57 179 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 FAM72CH0Y354 149 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 CXCR6O00574 342 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 TACR2P21452 398 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 GTF2H2Q13888 395 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 GTF2H2CQ6P1K8 395 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 NAPRTQ6XQN6 538 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 AKAP14Q86UN6 197 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 FAM72BQ86X60 149 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 SVOPLQ8N434 492 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 SIDT2Q8NBJ9 832 aaKnown RBP16.64■□□□□ 0.26
VARS-215ENST00000375663 SOCS4Q8WXH5 440 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 TADA1Q96BN2 335 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 REPS1Q96D71 796 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 TMEM209Q96SK2 561 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 ATP13A3Q9H7F0 1226 aa16.64■□□□□ 0.26
VARS-215ENST00000375663 ARIH1Q9Y4X5 557 aaPredicted RBP16.64■□□□□ 0.26
VARS-215ENST00000375663 GON4LQ3T8J9 2241 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 TBL1XO60907 577 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 CLDN11O75508 207 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 SLC35E2BP0CK96 405 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 GRK4P32298 578 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 SULT2A1Q06520 285 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 CERS6Q6ZMG9 384 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 HDHD2Q9H0R4 259 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 GIN1Q9NXP7 522 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 GALPQ9UBC7 116 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 TUBGCP6Q96RT7 1819 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 TTC24A2A3L6 582 aaPredicted RBP16.64■□□□□ 0.25
VARS-215ENST00000375663 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.64■□□□□ 0.25
VARS-215ENST00000375663 MAPK8P45983 427 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 CXCR3P49682 368 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 SPPL2BQ8TCT7 592 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 ZNF778Q96MU6 729 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.256e-6■■■■□ 23.6
VARS-215ENST00000375663 ADAM30Q9UKF2 790 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
VARS-215ENST00000375663 ITGA2P17301 1181 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 PFKPQ01813 784 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 DUSP4Q13115 394 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 ZNF57Q68EA5 555 aaPredicted RBP16.64■□□□□ 0.25
VARS-215ENST00000375663 TMEM130Q8N3G9 435 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 PIK3C3Q8NEB9 887 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 TMEM74Q96NL1 305 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 ZNF696Q9H7X3 374 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 MAPRE3Q9UPY8 281 aa16.64■□□□□ 0.25
VARS-215ENST00000375663 A0A1W2PP18 115 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 ALDH1A2O94788 518 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 COL6A1P12109 1028 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 NOL9Q5SY16 702 aaKnown RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 CCDC80Q76M96 950 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 ZDHHC21Q8IVQ6 265 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 TMBIM1Q969X1 311 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 CDH1P12830 882 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 RAB14P61106 215 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 POLR2LP62875 67 aaKnown RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 ST13P5Q8NFI4 369 aaPredicted RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 ATL1Q8WXF7 558 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 FEM1CQ96JP0 617 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 CDK15Q96Q40 435 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 ZFYVE1Q9HBF4 777 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 PSME2Q9UL46 239 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 PRRC2BQ5JSZ5 2229 aaKnown RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 TRPM3Q9HCF6 1732 aaPredicted RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 A0A0G2JLL6 359 aaPredicted RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 CENPXA8MT69 81 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 ITGA1P56199 1179 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 DNAJB13P59910 316 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 ZNF829Q3KNS6 432 aaPredicted RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 UBE2R2Q712K3 238 aaPredicted RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 PRRT2Q7Z6L0 340 aaPredicted RBP16.63■□□□□ 0.25
VARS-215ENST00000375663 CYP4Z2PQ8N1L4 340 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 CGREF1Q99674 301 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 SMOQ99835 787 aa16.63■□□□□ 0.25
VARS-215ENST00000375663 PIPSLA2A3N6 862 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 TMCC2O75069 709 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 ZNF423Q2M1K9 1284 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 PIGGQ5H8A4 983 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
VARS-215ENST00000375663 LIX1Q8N485 282 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 NACC2Q96BF6 587 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 CDKN2AIPNLQ96HQ2 116 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 TEPSINQ96N21 525 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 TUBA8Q9NY65 449 aaPredicted RBP16.62■□□□□ 0.25
VARS-215ENST00000375663 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 ECI2O75521 394 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 ESR1P03372 595 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 CTSKP43235 329 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 DGKQP52824 942 aa16.62■□□□□ 0.25
VARS-215ENST00000375663 OLR1P78380 273 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms