RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 ANXA8L1Q5VT79 327 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 HEPHL1Q6MZM0 1159 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PAOXQ6QHF9 649 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GK5Q6ZS86 529 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 KATNAL2Q8IYT4 538 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FAM71DQ8N9W8 422 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 OR4K17Q8NGC6 315 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 OR6K6Q8NGW6 343 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SGMS2Q8NHU3 365 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 AP3S1Q92572 193 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TMEM143Q96AN5 459 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 AURKBQ96GD4 344 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 CALR3Q96L12 384 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SGCZQ96LD1 299 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 C9orf72Q96LT7 481 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF670Q9BS34 389 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TAS2R13Q9NYV9 303 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ERGIC3Q9Y282 383 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 EFCAB5A4FU69 1503 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 CAPN8A6NHC0 703 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 SEC14L5O43304 696 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 GRID2O43424 1007 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 KCNQ3O43525 872 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 KLHL41O60662 606 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ANXA6P08133 673 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 AVPR1BP47901 424 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 MANFP55145 182 aaKnown RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ERVK-21P61565 698 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 SERINC3Q13530 473 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 STK11Q15831 433 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 TKFCQ3LXA3 575 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 TRIM61Q5EBN2 209 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 HYIQ5T013 277 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 PDSS1Q5T2R2 415 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 FAM69AQ5T7M9 428 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 NAPEPLDQ6IQ20 393 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 EFCAB12Q6NXP0 572 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 C3orf62Q6ZUJ4 267 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 APTXQ7Z2E3 356 aaKnown RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 TRPV1Q8NER1 839 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 OR5J2Q8NH18 312 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 RIT1Q92963 219 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 KAT5Q92993 513 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ACSS3Q9H6R3 686 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 EIF3KQ9UBQ5 218 aaKnown RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ST3GAL5Q9UNP4 418 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 EVPLQ92817 2033 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 XDHP47989 1333 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF705FA8MVS1 300 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 MAGEC1O60732 1142 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 CYP3A4P08684 503 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 SUPT20HL2P0C7V6 817 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF705DP0CH99 300 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF705BP0CI00 300 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 DEFA4P12838 97 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 MC4RP32245 332 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 SRP14P37108 136 aaKnown RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 MAP3K8P41279 467 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 RPS9P46781 194 aaKnown RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 CEBPDP49716 269 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 VSX2P58304 361 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 HERVK_113P62684 666 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 CDC42EP1Q00587 391 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 SULT2A1Q06520 285 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 PTK7Q13308 1070 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 NFATC4Q14934 902 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 C9orf64Q5T6V5 341 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 RESP18Q5W5W9 173 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 RETSATQ6NUM9 610 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 FRMD7Q6ZUT3 714 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 LANCL3Q6ZV70 420 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 HSD17B13Q7Z5P4 300 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ST8SIA2Q92186 375 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 TM9SF4Q92544 642 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 SLC38A4Q969I6 547 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZDHHC12Q96GR4 267 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 APOPT1Q96IL0 206 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 METTL9Q9H1A3 318 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 JPH1Q9HDC5 661 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ARHGAP20Q9P2F6 1191 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 CPA4Q9UI42 421 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 E7ENX8 843 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 KPNA4O00629 521 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 UBXN7O94888 489 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ITGAVP06756 1048 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 CYP21A2P08686 494 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 MLLT3P42568 568 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 HMGCS2P54868 508 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 TAP2Q03519 686 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 DGUOKQ16854 277 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 RALGPS1Q5JS13 557 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 FAM111BQ6SJ93 734 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 VSTM4Q8IW00 320 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF100Q8IYN0 542 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 Q8N402 240 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF557Q8N988 423 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-202ENST00000375405 C7orf57Q8NEG2 295 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ZCCHC10Q8TBK6 192 aa4.6□□□□□ -1.67
SCN1A-202ENST00000375405 ADAM32Q8TC27 787 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms