RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TTC30BQ8N4P2 665 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 AADATQ8N5Z0 425 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 POP5Q969H6 163 aaKnown RBP12.1□□□□□ -0.47
UBR4-203ENST00000375225 LRRC58Q96CX6 371 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 MYO19Q96H55 970 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 EXOC2Q96KP1 924 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 C3orf30Q96M34 536 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 BIRC8Q96P09 236 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 TCF25Q9BQ70 676 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 BRINP2Q9C0B6 783 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 AP3M1Q9Y2T2 418 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 DHRS7Q9Y394 339 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 PCDHGC4Q9Y5F7 938 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 INSL5Q9Y5Q6 135 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 SNX13Q9Y5W8 968 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 DHRS12A0PJE2 317 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 CDC7O00311 574 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 AKAP10O43572 662 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 TSPAN3O60637 253 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 SOCS5O75159 536 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 GMNNO75496 209 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 EEDO75530 441 aaKnown RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 MT-CO1P00395 513 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 OTCP00480 354 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 RB1P06400 928 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 PRR35P0CG20 571 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 BMP2P12643 396 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 DGKAP23743 735 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 FASP25445 335 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 HMGCLP35914 325 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 CSNK1DP48730 415 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 PIK3CGP48736 1102 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 ARF5P84085 180 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 BCL2L1Q07817 233 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 TRAF2Q12933 501 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 RALGDSQ12967 914 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 PCBP2Q15366 365 aaKnown RBP eCLIP12.09□□□□□ -0.471e-10■□□□□ 8.7
UBR4-203ENST00000375225 SMU1Q2TAY7 513 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 XKR7Q5GH72 579 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 KRT80Q6KB66 452 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 FBXL19Q6PCT2 694 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 TTC23LQ6PF05 361 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 ERMP1Q7Z2K6 904 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 CAMK1DQ8IU85 385 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 PHYKPLQ8IUZ5 450 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 FUNDC1Q8IVP5 155 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 LILRA2Q8N149 483 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 GALNT4Q8N4A0 578 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 SIDT2Q8NBJ9 832 aaKnown RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 CD200R1Q8TD46 325 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 ACDQ96AP0 544 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 DGCR14Q96DF8 476 aaKnown RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 SLC45A3Q96JT2 553 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 ZBTB18Q99592 522 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 C9orf16Q9BUW7 83 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 FAM126AQ9BYI3 521 aaPredicted RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 PCDHAC1Q9H158 963 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 FBRSL1Q9HCM7 1045 aaKnown RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 TLR9Q9NR96 1032 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 CCM2LQ9NUG4 571 aaPredicted RBP12.09□□□□□ -0.47
UBR4-203ENST00000375225 LHX3Q9UBR4 397 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 GPR45Q9Y5Y3 372 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 IRAK3Q9Y616 596 aa12.09□□□□□ -0.47
UBR4-203ENST00000375225 ENO4A6NNW6 628 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 NIPSNAP2O75323 286 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 IGSF6O95976 241 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 LRG1P02750 347 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 KLKB1P03952 638 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 CD1EP15812 388 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 HMOX2P30519 316 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 ARL1P40616 181 aaPredicted RBP12.08□□□□□ -0.48
UBR4-203ENST00000375225 GRIA3P42263 894 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 POLR2JP52435 117 aaKnown RBP12.08□□□□□ -0.48
UBR4-203ENST00000375225 TXNL4AP83876 142 aaKnown RBP12.08□□□□□ -0.48
UBR4-203ENST00000375225 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.48
UBR4-203ENST00000375225 PRKG2Q13237 762 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 RCAN2Q14206 197 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 GRB7Q14451 532 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 CNPY1Q3B7I2 92 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 VPS26BQ4G0F5 336 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 CTSL3PQ5NE16 218 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 C6orf10Q5SRN2 563 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 INTS11Q5TA45 600 aaKnown RBP12.08□□□□□ -0.48
UBR4-203ENST00000375225 PLPP4Q5VZY2 271 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 CYHR1Q6ZMK1 362 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 ZBTB49Q6ZSB9 765 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 SNX20Q7Z614 316 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 ELMOD1Q8N336 334 aa12.08□□□□□ -0.48
UBR4-203ENST00000375225 FAM156AQ8NDB6 213 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms