RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 CREB5Q02930 508 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ITKQ08881 620 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 POM121L1PQ3SYA9 428 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ATXN7L2Q5T6C5 722 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF470Q6ECI4 717 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 LRRC8EQ6NSJ5 796 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 RETSATQ6NUM9 610 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 KDELC2Q7Z4H8 507 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CENPLQ8N0S6 344 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 FSTL5Q8N475 847 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SLC25A41Q8N5S1 370 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 FBXO27Q8NI29 283 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 FRS2Q8WU20 508 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 KCTD4Q8WVF5 259 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 STON2Q8WXE9 905 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CMTM5Q96DZ9 223 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 S100A14Q9HCY8 104 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 PAIP2BQ9ULR5 123 aaKnown RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 MMP17Q9ULZ9 603 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 DMTF1Q9Y222 760 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 HS3ST2Q9Y278 367 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 TARM1B6A8C7 271 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 TK2O00142 265 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 MUSKO15146 869 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 GPR37L1O60883 481 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ATXN1LP0C7T5 689 aaKnown RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CDK4P11802 303 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 PRDX6P30041 224 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 GRIA4P48058 902 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SLC12A2P55011 1212 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 RAB15P59190 212 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SPIDRQ14159 915 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CYTH1Q15438 398 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CRY1Q16526 586 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 TMEM31Q5JXX7 168 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 TSTD2Q5T7W7 516 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SDE2Q6IQ49 451 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 BMP8AQ7Z5Y6 402 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 GALNT7Q86SF2 657 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SATL1Q86VE3 508 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CEP97Q8IW35 865 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SYNPOQ8N3V7 929 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 MARVELD2Q8N4S9 558 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 JADE3Q92613 823 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ELMO2Q96JJ3 720 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 MKRN2Q9H000 416 aaKnown RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CD93Q9NPY3 652 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 PRSS16Q9NQE7 514 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 UBA2Q9UBT2 640 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SLC7A8Q9UHI5 535 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 PPM1HQ9ULR3 514 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 TCRBV21S2A2A0A5A6 115 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 MROH6A6NGR9 719 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 SLCO1B7G3V0H7 640 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 EPOP01588 193 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 SRPRAP08240 638 aaKnown RBP14.14□□□□□ -0.15
HMGA1-203ENST00000374116 VCLP18206 1134 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 CPOXP36551 454 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 NNMTP40261 264 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 RGRP47804 291 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 RPL14P50914 215 aaKnown RBP14.14□□□□□ -0.15
HMGA1-203ENST00000374116 METAP1P53582 386 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 COPAP53621 1224 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 DMWDQ09019 674 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 ILF2Q12905 390 aaKnown RBP14.14□□□□□ -0.15
HMGA1-203ENST00000374116 PRKAA1Q13131 559 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 C9orf64Q5T6V5 341 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 VWA5B1Q5TIE3 1220 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 C22orf39Q6P5X5 142 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 STK40Q8N2I9 435 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 SPEM1Q8N4L4 309 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 CHST14Q8NCH0 376 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 PDCD6IPQ8WUM4 868 aaKnown RBP14.14□□□□□ -0.15
HMGA1-203ENST00000374116 HMGB4Q8WW32 186 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 GPR78Q96P69 363 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 GABRG3Q99928 467 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 LRFN3Q9BTN0 628 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 THTPAQ9BU02 230 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 KLHL4Q9C0H6 718 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 FAIMQ9NVQ4 179 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 VTI1BQ9UEU0 232 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.14□□□□□ -0.15
HMGA1-203ENST00000374116 CKAP5Q14008 2032 aa14.14□□□□□ -0.15
HMGA1-203ENST00000374116 PRR33A8MZF0 331 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 MATN2O00339 956 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SLC7A4O43246 635 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 DENRO43583 198 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SYNCRIPO60506 623 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 NCF2P19878 526 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 GLRBP48167 497 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 LEPRP48357 1165 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 TAS2R39P59534 338 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 ENPP2Q13822 863 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 PDK3Q15120 406 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 HNRNPA1L2Q32P51 320 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SIRPB2Q5JXA9 342 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 DUS1LQ6P1R4 473 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SYT13Q7L8C5 426 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms