RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TAF1AQ15573 450 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 TIGD5Q53EQ6 642 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RASAL3Q86YV0 1011 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 TCAIMQ8N3R3 496 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 OR4A15Q8NGL6 344 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RTP4Q96DX8 246 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 TMEM209Q96SK2 561 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 PCDHGC4Q9Y5F7 938 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 BTBD19C9JJ37 291 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 SNPHO15079 494 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 OLR1P78380 273 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RFTN1Q14699 578 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 NSMCE3Q96MG7 304 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 NRP1O14786 923 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 ESR1P03372 595 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 IL6P05231 212 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 EPORP19235 508 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 TLR1Q15399 786 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RAB6CQ53S08 254 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 TNFAIP8L3Q5GJ75 292 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 TRAPPC5Q8IUR0 188 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 HID1Q8IV36 788 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 HTRA1Q92743 480 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 BBS4Q96RK4 519 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RAB6CQ9H0N0 254 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 FPGTO14772 594 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 HDCP19113 662 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ECT2LQ008S8 904 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ABRQ12979 859 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 IKBKEQ14164 716 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TRIM40Q6P9F5 258 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PAQR3Q6TCH7 311 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 UBE2E3Q969T4 207 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 OSGEPL1Q9H4B0 414 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 CAPN10Q9HC96 672 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 A0A1B0GW55 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TRBC1P01850 177 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4L2P0CJ85 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4L3P0CJ86 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4L4P0CJ87 422 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4L5P0CJ88 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4L6P0CJ89 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4L7P0CJ90 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 YAP1P46937 504 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TRIM32Q13049 653 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 FAM174BQ3ZCQ3 159 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PIM3Q86V86 326 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TMEM174Q8WUU8 243 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 NACC2Q96BF6 587 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PREBQ9HCU5 417 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 RAD18Q9NS91 495 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 DUX4Q9UBX2 424 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 KERAO60938 352 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 FAM163BP0C2L3 166 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 SLC6A2P23975 617 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ATAD3BQ5T9A4 648 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 CPTPQ5TA50 214 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 KLHL17Q6TDP4 642 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 RPS27LQ71UM5 84 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TXNDC5Q8NBS9 432 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 C2CD4AQ8NCU7 369 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PIK3C3Q8NEB9 887 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TRPV3Q8NET8 790 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 FBXO27Q8NI29 283 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ZFP37Q9Y6Q3 630 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 HTRA2O43464 458 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PAICSP22234 425 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ITPKAP23677 461 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PTGER3P43115 390 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 GSK3BP49841 420 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 CDH4P55283 916 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ZNF33AQ06730 810 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 SIRPB2Q5JXA9 342 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 RBM48Q5RL73 367 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 AHSA2Q719I0 299 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ST13P5Q8NFI4 369 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 OXCT2Q9BYC2 517 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 MRM3Q9HC36 420 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ANKDD1BA6NHY2 528 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 CENPXA8MT69 81 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 ACSL4O60488 711 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 C1RP00736 705 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 CXCR3P49682 368 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 SLC10A7Q0GE19 358 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 R3HCC1LQ7Z5L2 792 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 GLB1L3Q8NCI6 653 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 NRG4Q8WWG1 115 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 KCNK13Q9HB14 408 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PTBP2Q9UKA9 531 aaKnown RBP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPRU-202ENST00000373779 TLR6Q9Y2C9 796 aa17.23■□□□□ 0.35
PTPRU-202ENST00000373779 PRAMEF1O95521 474 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 AQP1P29972 269 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 RFX3P48380 749 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 TAB1Q15750 504 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms