RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 KIAA0930Q6ICG6 404 aaPredicted RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 NRROSQ86YC3 692 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 ZNF547Q8IVP9 402 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 EID2Q8N6I1 236 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 CFAP36Q96G28 342 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 EBNA1BP2Q99848 306 aaKnown RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 CATSPERZQ9NTU4 200 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 CDV3Q9UKY7 258 aaKnown RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 PCDHGB2Q9Y5G2 931 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 CHUKO15111 745 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 FLRT2O43155 660 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 ACSL3O95573 720 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 ACP5P13686 325 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 MSH3P20585 1137 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 ARCN1P48444 511 aaKnown RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 CTBSQ01459 385 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 CBLBQ13191 982 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 SLC14A1Q13336 389 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 SLC29A2Q14542 456 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 CRYMQ14894 314 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 CHST15Q7LFX5 561 aaPredicted RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 MTERF4Q7Z6M4 381 aaKnown RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 TMEM135Q86UB9 458 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 TRAPPC5Q8IUR0 188 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 SFTPA2Q8IWL1 248 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 BEND7Q8N7W2 519 aaPredicted RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 SETD7Q8WTS6 366 aaKnown RBP18.28■□□□□ 0.52
CDX4-201ENST00000373514 ZDHHC3Q9NYG2 299 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 TEX264Q9Y6I9 313 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 PRSS21Q9Y6M0 314 aa18.28■□□□□ 0.52
CDX4-201ENST00000373514 TRIM38O00635 465 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 SLC30A4O14863 429 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 GRID2O43424 1007 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 VEGFDO43915 354 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 USP1O94782 785 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 MYF5P13349 255 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 PBLDP30039 288 aaPredicted RBP18.27■□□□□ 0.51
CDX4-201ENST00000373514 GTF2H3Q13889 308 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 FASTKD1Q53R41 847 aaKnown RBP18.27■□□□□ 0.51
CDX4-201ENST00000373514 SLC30A9Q6PML9 568 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 LRIG3Q6UXM1 1119 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 DBX2Q6ZNG2 339 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 OTUD6BQ8N6M0 293 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 FBXO36Q8NEA4 188 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 OR2W6PQ8NHA6 318 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 UHMK1Q8TAS1 419 aaKnown RBP18.27■□□□□ 0.51
CDX4-201ENST00000373514 PYROXD1Q8WU10 500 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 SGF29Q96ES7 293 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 TTC25Q96NG3 672 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 RUFY1Q96T51 708 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 COPS8Q99627 209 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 ZCCHC2Q9C0B9 1178 aaKnown RBP18.27■□□□□ 0.51
CDX4-201ENST00000373514 NFS1Q9Y697 457 aa18.27■□□□□ 0.51
CDX4-201ENST00000373514 IGLV3-16A0A075B6K0 115 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 AGPSO00116 658 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 CD3EAPO15446 510 aaKnown RBP18.26■□□□□ 0.51
CDX4-201ENST00000373514 SGTAO43765 313 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 OR1I1O60431 355 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 NUDT17P0C025 328 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 ELOCQ15369 112 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 UNC5AQ6ZN44 842 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 CAPN12Q6ZSI9 719 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 TAF8Q7Z7C8 310 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 C11orf96Q7Z7L8 435 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 LRRTM4Q86VH4 590 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
CDX4-201ENST00000373514 FSTL5Q8N475 847 aaPredicted RBP18.26■□□□□ 0.51
CDX4-201ENST00000373514 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDX4-201ENST00000373514 DEFB124Q8NES8 71 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 RHBDD1Q8TEB9 315 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 RMI1Q9H9A7 625 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 SLC23A2Q9UGH3 650 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 PCOLCE2Q9UKZ9 415 aa18.26■□□□□ 0.51
CDX4-201ENST00000373514 MAGEB16A2A368 324 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 TM4SF5O14894 197 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 YY2O15391 372 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 SIGLEC6O43699 453 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 POLBP06746 335 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 ANXA6P08133 673 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 ACTR1BP42025 376 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 GRK6P43250 576 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 ACTR1AP61163 376 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 SUZ12Q15022 739 aaKnown RBP18.25■□□□□ 0.51
CDX4-201ENST00000373514 INSCQ1MX18 579 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 ARMC3Q5W041 872 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 TMEM220Q6QAJ8 160 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 PIP4P1Q86T03 277 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 CLDN19Q8N6F1 224 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 OR4C6Q8NH72 309 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 BAHD1Q8TBE0 780 aaPredicted RBP18.25■□□□□ 0.51
CDX4-201ENST00000373514 GPBAR1Q8TDU6 330 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.25■□□□□ 0.51
CDX4-201ENST00000373514 DCUN1D1Q96GG9 259 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 SGSM3Q96HU1 749 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 LRRC4CQ9HCJ2 640 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 TRNAU1APQ9NX07 287 aaKnown RBP18.25■□□□□ 0.51
CDX4-201ENST00000373514 NLGN3Q9NZ94 848 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 SIRPGQ9P1W8 387 aa18.25■□□□□ 0.51
CDX4-201ENST00000373514 SLC17A6Q9P2U8 582 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms