RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PFDN4Q9NQP4 134 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ADA2Q9NZK5 511 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 TIMM22Q9Y584 194 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 TNPO3Q9Y5L0 923 aaKnown RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 NPIPB15A6NHN6 443 aaPredicted RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 H3BNX3 289 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 TRIM38O00635 465 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 PER2O15055 1255 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 BNIP3LO60238 219 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 MOSPD3O75425 235 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 SLC25A14O95258 325 aaPredicted RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 POP4O95707 220 aaKnown RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 HGFP14210 728 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 DGKAP23743 735 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 PRDX3P30048 256 aaKnown RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 MSX2P35548 267 aaPredicted RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ECT2LQ008S8 904 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 MS4A2Q01362 244 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 SHHQ15465 462 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 CARD16Q5EG05 197 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ASTLQ6HA08 431 aaPredicted RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 HACD2Q6Y1H2 254 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 USP45Q70EL2 814 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 TSPAN33Q86UF1 283 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 MIER2Q8N344 545 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 CLDN19Q8N6F1 224 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 RNF148Q8N7C7 305 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 OR9I1Q8NGQ6 314 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ESAMQ96AP7 390 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 CCDC97Q96F63 343 aaPredicted RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ASIC4Q96FT7 647 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ZNF641Q96N77 438 aaPredicted RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 EIF2B4Q9UI10 523 aaKnown RBP13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ZNF225Q9UK10 706 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 ADAMTS6Q9UKP5 1117 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 PRSS21Q9Y6M0 314 aa13.23□□□□□ -0.29
CSTF2-201ENST00000372972 AGAP14A8MT82 685 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 BBIP1A8MTZ0 92 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 MRASO14807 208 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 BCAS2O75934 225 aaPredicted RBP13.22□□□□□ -0.29
CSTF2-201ENST00000372972 TRIM16O95361 564 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 RHOP08100 348 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 PCBP2Q15366 365 aaKnown RBP eCLIP13.22□□□□□ -0.29
CSTF2-201ENST00000372972 GSTA3Q16772 222 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 SBSNQ6UWP8 590 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 IZUMO2Q6UXV1 221 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 MACC1Q6ZN28 852 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 GPRIN3Q6ZVF9 776 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 SPATA19Q7Z5L4 167 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 MYO1HQ8N1T3 1032 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 NXPE1Q8N323 547 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 ZNF557Q8N988 423 aaPredicted RBP13.22□□□□□ -0.29
CSTF2-201ENST00000372972 SNX31Q8N9S9 440 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 GPR26Q8NDV2 337 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 RIN3Q8TB24 985 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 IRF7Q92985 503 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 PLEKHG4BQ96PX9 1271 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 ZNF382Q96SR6 550 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 CCT7Q99832 543 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 ECSITQ9BQ95 431 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 BBS2Q9BXC9 721 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 GIMAP2Q9UG22 337 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 CROTQ9UKG9 612 aa13.22□□□□□ -0.29
CSTF2-201ENST00000372972 SOBPA7XYQ1 873 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 E7ENX8 843 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 ACOT8O14734 319 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 LIN7AO14910 233 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 RAD51BO15315 384 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 MATN4O95460 622 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 IDO1P14902 403 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 ITGB6P18564 788 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 HOXA9P31269 272 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 CCNHP51946 323 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 NTHL1P78549 312 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 GPM6BQ13491 265 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 BLMHQ13867 455 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 RPS6KA2Q15349 733 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 SLC5A9Q2M3M2 681 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 ZNF697Q5TEC3 545 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 LRRC66Q68CR7 880 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 OGFOD2Q6N063 350 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 DPY19L3Q6ZPD9 716 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 PCYOX1LQ8NBM8 494 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 ROPN1LQ96C74 230 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 MCCC1Q96RQ3 725 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 FAM126AQ9BYI3 521 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 SPAG4Q9NPE6 437 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 SDR39U1Q9NRG7 319 aaPredicted RBP13.21□□□□□ -0.29
CSTF2-201ENST00000372972 TBC1D14Q9P2M4 693 aa13.21□□□□□ -0.29
CSTF2-201ENST00000372972 SLCO3A1Q9UIG8 710 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms