RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FRA10AC1Q70Z53 315 aa24.69■■□□□ 1.54
CTSA-203ENST00000372459 MYO1HQ8N1T3 1032 aa24.69■■□□□ 1.54
CTSA-203ENST00000372459 HCAR2Q8TDS4 363 aa24.69■■□□□ 1.54
CTSA-203ENST00000372459 NAT14Q8WUY8 206 aa24.69■■□□□ 1.54
CTSA-203ENST00000372459 LENG8Q96PV6 779 aaPredicted RBP24.69■■□□□ 1.54
CTSA-203ENST00000372459 LAMA3Q16787 3333 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 GM2AP17900 193 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 ZBTB2Q8N680 514 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 MTG2Q9H4K7 406 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 IGFLR1Q9H665 355 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 SPATS2LQ9NUQ6 558 aaKnown RBP24.68■■□□□ 1.54
CTSA-203ENST00000372459 DKK3Q9UBP4 350 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 MSRAQ9UJ68 235 aa24.68■■□□□ 1.54
CTSA-203ENST00000372459 RGSL1A5PLK6 1076 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 AZIN1O14977 448 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 TM7SF2O76062 418 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 TIMP2P16035 220 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 XPAP23025 273 aaPredicted RBP24.67■■□□□ 1.54
CTSA-203ENST00000372459 RAP1GDS1P52306 607 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 CRY1Q16526 586 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 GPRC6AQ5T6X5 926 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 PELI3Q8N2H9 469 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 PANX3Q96QZ0 392 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 THTPAQ9BU02 230 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 PCDH12Q9NPG4 1184 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 THG1LQ9NWX6 298 aaKnown RBP24.67■■□□□ 1.54
CTSA-203ENST00000372459 DEC1Q9P2X7 70 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 NKX1-2Q9UD57 310 aaPredicted RBP24.67■■□□□ 1.54
CTSA-203ENST00000372459 TTLL9Q3SXZ7 439 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 UGT3A2Q3SY77 523 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 GPR149Q86SP6 731 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 SCUBE1Q8IWY4 988 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 RP9Q8TA86 221 aaKnown RBP24.67■■□□□ 1.54
CTSA-203ENST00000372459 ZNF483Q8TF39 744 aaPredicted RBP24.67■■□□□ 1.54
CTSA-203ENST00000372459 PPP2R3CQ969Q6 453 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 RTKNQ9BST9 563 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 APOL5Q9BWW9 433 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 TRPV4Q9HBA0 871 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 LATS2Q9NRM7 1088 aa24.67■■□□□ 1.54
CTSA-203ENST00000372459 COPG1Q9Y678 874 aaKnown RBP24.67■■□□□ 1.54
CTSA-203ENST00000372459 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.66■■□□□ 1.54
CTSA-203ENST00000372459 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.66■■□□□ 1.54
CTSA-203ENST00000372459 PPP6CO00743 305 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 MLYCDO95822 493 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 SLC6A11P48066 632 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 SLC25A3Q00325 362 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 KANK2Q63ZY3 851 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 CHSY3Q70JA7 882 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 C19orf60Q96EN9 201 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 FAM83CQ9BQN1 747 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 SPATA16Q9BXB7 569 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 ZBTB26Q9HCK0 441 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 SEMA4BQ9NPR2 832 aaPredicted RBP24.66■■□□□ 1.54
CTSA-203ENST00000372459 CD84Q9UIB8 345 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 PCTPQ9UKL6 214 aa24.66■■□□□ 1.54
CTSA-203ENST00000372459 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.66■■□□□ 1.54
CTSA-203ENST00000372459 PLXNB3Q9ULL4 1909 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 IGLV3-16A0A075B6K0 115 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 AGTR2P50052 363 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 DCDC1P59894 354 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 CUL3Q13618 768 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 PDGFRLQ15198 375 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 ZRSR2Q15696 482 aaKnown RBP24.65■■□□□ 1.54
CTSA-203ENST00000372459 FBXO48Q5FWF7 155 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 SBSNQ6UWP8 590 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 ZNF366Q8N895 744 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 NXPE3Q969Y0 559 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 MARK4Q96L34 752 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 FAM161BQ96MY7 647 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 RAD18Q9NS91 495 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 TSR3Q9UJK0 312 aaKnown RBP24.65■■□□□ 1.54
CTSA-203ENST00000372459 DNAJC15Q9Y5T4 150 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 C16orf96A6NNT2 1141 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 PRRT4C9JH25 899 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 S100BP04271 92 aaPredicted RBP24.65■■□□□ 1.54
CTSA-203ENST00000372459 CYLC2Q14093 348 aaPredicted RBP24.65■■□□□ 1.54
CTSA-203ENST00000372459 HERC3Q15034 1050 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 RAB30Q15771 203 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 GAB4Q2WGN9 574 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 ULK2Q8IYT8 1036 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 FAM126AQ9BYI3 521 aaPredicted RBP24.65■■□□□ 1.54
CTSA-203ENST00000372459 FAM83DQ9H4H8 585 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 KCTD5Q9NXV2 234 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 UTP6Q9NYH9 597 aaKnown RBP24.65■■□□□ 1.54
CTSA-203ENST00000372459 KLHL42Q9P2K6 505 aa24.65■■□□□ 1.54
CTSA-203ENST00000372459 OTOL1A6NHN0 477 aaPredicted RBP24.64■■□□□ 1.54
CTSA-203ENST00000372459 EPOPA6NHQ4 379 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 UBDO15205 165 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 RAD51BO15315 384 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 GPC4O75487 556 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 B4GALNT1Q00973 533 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 EIF4HQ15056 248 aaKnown RBP24.64■■□□□ 1.54
CTSA-203ENST00000372459 CMPK2Q5EBM0 449 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 ACSBG2Q5FVE4 666 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 DPPA4Q7L190 304 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 HSD11B1LQ7Z5J1 315 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 SNX32Q86XE0 403 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 DCLRE1BQ9H816 532 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 SLC28A3Q9HAS3 691 aa24.64■■□□□ 1.54
CTSA-203ENST00000372459 SMOXQ9NWM0 555 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms