RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 FRG1Q14331 258 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SEMA3AQ14563 771 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 MXD4Q14582 209 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 LRIT3Q3SXY7 679 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PRSS36Q5K4E3 855 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TMTC4Q5T4D3 741 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 HECTD2Q5U5R9 776 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 BROXQ5VW32 411 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 NXNL2Q5VZ03 156 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 GLYATQ6IB77 296 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 NEPROQ6NW34 567 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TFAP2DQ7Z6R9 452 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ISCA2Q86U28 154 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ERO1BQ86YB8 467 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PHYKPLQ8IUZ5 450 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SCML4Q8N228 414 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 NLGN1Q8N2Q7 840 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SFRP1Q8N474 314 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TP53I13Q8NBR0 393 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CLHC1Q8NHS4 586 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF420Q8TAQ5 688 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PMM1Q92871 262 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 RNF34Q969K3 372 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TEKT5Q96M29 485 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 GAD1Q99259 594 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TBL1YQ9BQ87 522 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 MRPL57Q9BQC6 102 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 NAT9Q9BTE0 207 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 MED10Q9BTT4 135 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PLEKHA5Q9HAU0 1116 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 WDR6Q9NNW5 1121 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SLC6A13Q9NSD5 602 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 POLR3BQ9NW08 1133 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 C14orf119Q9NWQ9 140 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FAM118AQ9NWS6 357 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TUBA8Q9NY65 449 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ACTR3BQ9P1U1 418 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 HACL1Q9UJ83 578 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TMED5Q9Y3A6 229 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 GJA3Q9Y6H8 435 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 MYLKQ15746 1914 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 DYTNA2CJ06 578 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TRIM64BA6NI03 449 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 UPK3BL1B0FP48 263 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 HACD1B0YJ81 288 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 FAM47E-STBD1D6RA91 191 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 UPK3BL2E5RIL1 263 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 MEN1O00255 615 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 RFXAPO00287 272 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 NPHS1O60500 1241 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 C22orf31O95567 290 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CHEK2O96017 543 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ALPLP05186 524 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 THRBP10828 461 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CDKN1CP49918 316 aaPredicted RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 HTR6P50406 440 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TMBIM6P55061 237 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CBLBQ13191 982 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 PAFAH1B3Q15102 231 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 FAM209AQ5JX71 171 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 C6orf141Q5SZD1 244 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 FAM160B1Q5W0V3 765 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 WSCD1Q658N2 575 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 STEAP3Q658P3 488 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF549Q6P9A3 640 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 PLEKHG7Q6ZR37 379 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TAS2R42Q7RTR8 314 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 LINC00523Q86TU6 105 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ADCK1Q86TW2 530 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SYTL1Q8IYJ3 562 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 UBE2J2Q8N2K1 259 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 POC5Q8NA72 575 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SLC43A3Q8NBI5 491 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 HASPINQ8TF76 798 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 GJD4Q96KN9 370 aaPredicted RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 HSFY1Q96LI6 401 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZFP42Q96MM3 310 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 NPY6RQ99463 290 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SH3GL1Q99961 368 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CLSTN3Q9BQT9 956 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 KIFC1Q9BW19 673 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 C6orf62Q9GZU0 229 aaPredicted RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CYP3A43Q9HB55 503 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 VNN3Q9NY84 501 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 MOSPD1Q9UJG1 213 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF225Q9UK10 706 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 EIF3LQ9Y262 564 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SPEGQ15772 3267 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF646O15015 1829 aaPredicted RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 RANBP2P49792 3224 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 IGKV6-21A0A0C4DH24 114 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 IQCA1LA6NCM1 817 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ADM5C9JUS6 153 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SLCO1B7G3V0H7 640 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 M0R3G1 203 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CDC7O00311 574 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TREHO43280 583 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 DFNA5O60443 496 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms