RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 IKZF3Q9UKT9 509 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 APOC1P02654 83 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 AP1S1P61966 158 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 LINGO4Q6UY18 593 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 ANKS1BQ7Z6G8 1248 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 TMEM139Q8IV31 216 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 GSTCDQ8NEC7 633 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 C7orf43Q8WVR3 580 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 GLYATL1P3A0A0U1RQE8 302 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 A0A1W2PPM1 405 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 DBTP11182 482 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 USP46P62068 366 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 RFX4Q33E94 735 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 SPESP1Q6UW49 350 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 C10orf107Q8IVU9 208 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 LEMD2Q8NC56 503 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PWWP2AQ96N64 755 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 MAGEH1Q9H213 219 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 F8A1P23610 371 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PBX3P40426 434 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PTPN9P43378 593 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 ASPAP45381 313 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 IDH2P48735 452 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 TEX44Q53QW1 395 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 DNAJB14Q8TBM8 379 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 ACE2Q9BYF1 805 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 NDUFAF4Q9P032 175 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 RAB26Q9ULW5 256 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 A8MUI8 341 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 RB1P06400 928 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 RPP38P78345 283 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 ARHGAP8P85298 464 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 HSF2Q03933 536 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 TEAD4Q15561 434 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNHIT3Q15649 155 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 GARNL3Q5VVW2 1013 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 ADAMTSL2Q86TH1 951 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZDHHC4Q9NPG8 344 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 TGDSO95455 350 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 SNAI1O95863 264 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF37AP17032 561 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 DAOAP59103 153 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 GMFBP60983 142 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 C6orf183Q5T699 404 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 PAGE2Q7Z2X7 111 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 CLNKQ7Z7G1 428 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 HERVK_113Q902F9 699 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 REXO5Q96IC2 774 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 PPP3R2Q96LZ3 170 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 IMP3Q9NV31 184 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 TRAFD1O14545 582 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 MFSD11O43934 449 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 POP4O95707 220 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 CST1P01037 141 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 BPGMP07738 259 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 LPIN1Q14693 890 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 PUS10Q3MIT2 529 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 OFCC1Q8IZS5 231 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 THRSPQ92748 146 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
RAPGEF1-201ENST00000372189 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 NOMO1Q15155 1222 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZFP69Q49AA0 526 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC25A24Q6NUK1 477 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 ARHGEF4Q9NR80 690 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC17A7Q9P2U7 560 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 COG5Q9UP83 839 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 CORO2BQ9UQ03 480 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 DDX3YO15523 660 aaKnown RBP13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 PEX11AO75192 247 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 F2P00734 622 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 TFEBP19484 476 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 NDST2P52849 883 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 RAB2AP61019 212 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 BLMHQ13867 455 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 LPCAT4Q643R3 524 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZBTB8BQ8NAP8 495 aaPredicted RBP13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 TLR9Q9NR96 1032 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZNF221Q9UK13 617 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 MAFFQ9ULX9 164 aa13.21□□□□□ -0.3
RAPGEF1-201ENST00000372189 RPP40O75818 363 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 TM7SF2O76062 418 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 LBX1P52954 281 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 PTSQ03393 145 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 HIPK1Q86Z02 1210 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 PHC2Q8IXK0 858 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms