RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 STX1BP61266 288 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 RELAQ04206 551 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 OTUD1Q5VV17 481 aaPredicted RBP11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 NIPAL1Q6NVV3 410 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 GALNT7Q86SF2 657 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 DENND1CQ8IV53 801 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 BBS7Q8IWZ6 715 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 CCNYL1Q8N7R7 359 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 ACVR1CQ8NER5 493 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 TBC1D15Q8TC07 691 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 CHPT1Q8WUD6 406 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 SNRNP27Q8WVK2 155 aaKnown RBP11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 NXPE3Q969Y0 559 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 PGAP3Q96FM1 320 aaPredicted RBP11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 PPP1R36Q96LQ0 422 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 C1orf50Q9BV19 199 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 BRD9Q9H8M2 597 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 LIN28AQ9H9Z2 209 aaKnown RBP11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 CHRAC1Q9NRG0 131 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 OBP2AQ9NY56 170 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 LSM7Q9UK45 103 aaKnown RBP11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 TLR6Q9Y2C9 796 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 GREB1Q4ZG55 1949 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 PATJQ8NI35 1801 aa11.36□□□□□ -0.59
TSPAN1-201ENST00000372003 DHRS12A0PJE2 317 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CCDC162PA2VCL2 907 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 H0YAE9 185 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 H3BMQ9 156 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 KCNK1O00180 336 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 DLGAP1O14490 977 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 MAGEB3O15480 346 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PHGDHO43175 533 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 IRAK2O43187 625 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CPNE6O95741 557 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 AHSGP02765 367 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PSMA4P25789 261 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CORO1AP31146 461 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ADRA1BP35368 520 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC26A3P40879 764 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CCR10P46092 362 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 KPNA1P52294 538 aaPredicted RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ATXN3P54252 364 aaPredicted RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TNK2Q07912 1038 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TDGQ13569 410 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC14A2Q15849 920 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 FAM83EQ2M2I3 478 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TECRLQ5HYJ1 363 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TBCELQ5QJ74 424 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 AGAP9Q5VTM2 703 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CNSTQ6PJW8 725 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 DCDC5Q6ZRR9 648 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC41A1Q8IVJ1 513 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ZNF786Q8N393 782 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TXNDC5Q8NBS9 432 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 C2CD4AQ8NCU7 369 aaPredicted RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CANT1Q8WVQ1 401 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PLD4Q96BZ4 506 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 NXNL1Q96CM4 212 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TSPAN17Q96FV3 270 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PLEKHA8Q96JA3 519 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 COG8Q96MW5 612 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PIGVQ9NUD9 493 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ARHGEF38Q9NXL2 777 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 GIN1Q9NXP7 522 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 GTSE1Q9NYZ3 720 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 MUTYHQ9UIF7 546 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 COQ6Q9Y2Z9 468 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PLOD2O00469 737 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 GREM1O60565 184 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 USP12O75317 370 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 SERPINB7O75635 380 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TIPRLO75663 272 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 IPO13O94829 963 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 OCM2P0CE71 109 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 OCMP0CE72 109 aaPredicted RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ARSAP15289 507 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TCF3P15923 654 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CKMT2P17540 419 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 NFKB1P19838 968 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 GABRB3P28472 473 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CAPGP40121 348 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CD151P48509 253 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 MRPL19P49406 292 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 HLCSP50747 726 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CCT8P50990 548 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TPI1P60174 286 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 NAA20P61599 178 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 FCHO2Q0JRZ9 810 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TGFBIQ15582 683 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 HTR3DQ70Z44 454 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms