RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 MBNL1Q9NR56 388 aaKnown RBP14.84□□□□□ -0.03
LMO4-201ENST00000370542 EVA1BQ9NVM1 165 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 SPASTQ9UBP0 616 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 UBA2Q9UBT2 640 aaPredicted RBP14.84□□□□□ -0.03
LMO4-201ENST00000370542 CIDEBQ9UHD4 219 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 PCDHB1Q9Y5F3 818 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 UBR5O95071 2799 aaPredicted RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 SMIM31A0A1B0GVY4 71 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 TCRBV7S2A1N4TA0A589 114 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 J3KR12 359 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 ERVH48-1M5A8F1 160 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 GCATO75600 419 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 PIM1P11309 404 aaPredicted RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 ESRRAP11474 423 aaPredicted RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 MYF5P13349 255 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 LSSP48449 732 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 HCAR3P49019 387 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 ZNF135P52742 658 aaPredicted RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 ARFIP2P53365 341 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 TPI1P60174 286 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 NSUN2Q08J23 767 aaKnown RBP eCLIP14.83□□□□□ -0.04
LMO4-201ENST00000370542 CA9Q16790 459 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 MACC1Q6ZN28 852 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 LRRC69Q6ZNQ3 347 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 OTOAQ7RTW8 1153 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 ZC3H18Q86VM9 953 aaKnown RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 ARHGAP12Q8IWW6 846 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 NETO2Q8NC67 525 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 IFI44Q8TCB0 444 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 CXorf40AQ8TE69 158 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 ECHDC3Q96DC8 303 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 WBP1Q96G27 269 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 HIC2Q96JB3 615 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 DEPDC7Q96QD5 511 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 C1QTNF7Q9BXJ2 289 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 SLC39A8Q9C0K1 460 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 TCEAL2Q9H3H9 227 aaPredicted RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 CHCHD3Q9NX63 227 aaKnown RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 TBK1Q9UHD2 729 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 IPO11Q9UI26 975 aaKnown RBP14.83□□□□□ -0.04
LMO4-201ENST00000370542 AP4E1Q9UPM8 1137 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 GMEB1Q9Y692 573 aa14.83□□□□□ -0.04
LMO4-201ENST00000370542 KLF11O14901 512 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 PROSCO94903 275 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 PTPN7P35236 360 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 KLF1Q13351 362 aaPredicted RBP14.82□□□□□ -0.04
LMO4-201ENST00000370542 WSCD2Q2TBF2 565 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 KHDC1Q4VXA5 237 aaKnown RBP14.82□□□□□ -0.04
LMO4-201ENST00000370542 LRRC73Q5JTD7 316 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 C6orf132Q5T0Z8 1188 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 UBAP2Q5T6F2 1119 aaKnown RBP14.82□□□□□ -0.04
LMO4-201ENST00000370542 BRAT1Q6PJG6 821 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 ZSWIM9Q86XI8 627 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 PHACTR4Q8IZ21 702 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 RCOR2Q8IZ40 523 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 ALDH16A1Q8IZ83 802 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 RBFAQ8N0V3 343 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 LSMEM2Q8N112 164 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 SDR16C5Q8N3Y7 309 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 LMX1AQ8TE12 382 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 GFM2Q969S9 779 aaKnown RBP14.82□□□□□ -0.04
LMO4-201ENST00000370542 ZNF578Q96N58 590 aaPredicted RBP14.82□□□□□ -0.04
LMO4-201ENST00000370542 PEBP4Q96S96 227 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 LRRC61Q9BV99 259 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 CLPBQ9H078 707 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 SAYSD1Q9NPB0 183 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 SCINQ9Y6U3 715 aa14.82□□□□□ -0.04
LMO4-201ENST00000370542 ARHGAP42A6NI28 874 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 H0Y3Z8 333 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 RRP8O43159 456 aaKnown RBP14.81□□□□□ -0.04
LMO4-201ENST00000370542 ENTPD5O75356 428 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 FAM155BO75949 473 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 PIGNO95427 931 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 DESP17661 470 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 TGM2P21980 687 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 PSMA2P25787 234 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 MIPP30301 263 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 MMP12P39900 470 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 RGRP47804 291 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 THOP1P52888 689 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 ERVPABLB-1P60509 514 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 SNX1Q13596 522 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 RFTN1Q14699 578 aaPredicted RBP14.81□□□□□ -0.04
LMO4-201ENST00000370542 IRF4Q15306 451 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 ISXQ2M1V0 245 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 DEFB133Q30KQ1 61 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 PRRT3Q5FWE3 981 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 TMCO4Q5TGY1 634 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 GUSBP11Q6P575 273 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 LVRNQ6Q4G3 990 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 RFX8Q6ZV50 586 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 GSTA5Q7RTV2 222 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 ZNF354CQ86Y25 554 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 SLC35F3Q8IY50 421 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 RAB3IL1Q8TBN0 382 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 EXOC2Q96KP1 924 aa14.81□□□□□ -0.04
LMO4-201ENST00000370542 KCTD15Q96SI1 283 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms