RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 NRP2O60462 931 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 F7P08709 466 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 ACP5P13686 325 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 DDX6P26196 483 aaKnown RBP eCLIP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 S100GP29377 79 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 IL12RB1P42701 662 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 IRF2BP2Q7Z5L9 587 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 DHDDSQ86SQ9 333 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TMEM27Q9HBJ8 222 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SLCO1B3Q9NPD5 702 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 RASSF1Q9NS23 344 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 HBS1LQ9Y450 684 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PCDHB1Q9Y5F3 818 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PCDHGB3Q9Y5G1 929 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 KPNA4O00629 521 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PLOD3O60568 738 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 BMP6P22004 513 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SPIRE1Q08AE8 756 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 LARS2Q15031 903 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 CRY2Q49AN0 593 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TTC23Q5W5X9 447 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 RASSF6Q6ZTQ3 369 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 CXXC5Q7LFL8 322 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 GALNT7Q86SF2 657 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 CAMK1DQ8IU85 385 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SPPL2CQ8IUH8 684 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SLC34A3Q8N130 599 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TWIST2Q8WVJ9 160 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 FRMD6Q96NE9 622 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TRAPPC9Q96Q05 1148 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 MTX2O75431 263 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 FADS2O95864 444 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 POLR2JP52435 117 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 NEK5Q6P3R8 708 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 FBXW8Q8N3Y1 598 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 LIX1Q8N485 282 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 OR2L5Q8NG80 312 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PTCD3Q96EY7 689 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 GAL3ST1Q99999 423 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TRIM38O00635 465 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 EOMESO95936 686 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SERPINA1P01009 418 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 KCNJ5P48544 419 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 GATMP50440 423 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SLC7A2P52569 658 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PUS10Q3MIT2 529 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 CLEC4DQ8WXI8 215 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 NKD1Q969G9 470 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 CLUHO75153 1309 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 B3GALT2O43825 422 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 ADH5P11766 374 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 LAMP2P13473 410 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 GNALP38405 381 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 MTHFRP42898 656 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SGCBQ16585 318 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 ESRP1Q6NXG1 681 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 KRT74Q7RTS7 529 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PIWIL4Q7Z3Z4 852 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 TMEM192Q8IY95 271 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 YIPF4Q9BSR8 244 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SPATA9Q9BWV2 254 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 CHMP1AQ9HD42 196 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 COMMD9Q9P000 198 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 R3HDM2Q9Y2K5 976 aaKnown RBP8.47□□□□□ -1.05
ABCA4-201ENST00000370225 SASH3O75995 380 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 MT-ND1P03886 318 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 ALPIP09923 528 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 ZNF567Q8N184 647 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 RDH11Q8TC12 318 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 NIFKQ9BYG3 293 aaKnown RBP8.46□□□□□ -1.05
ABCA4-201ENST00000370225 MMADHCQ9H3L0 296 aaPredicted RBP8.46□□□□□ -1.05
ABCA4-201ENST00000370225 ALG2Q9H553 416 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 ABCB10Q9NRK6 738 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 DHRS12A0PJE2 317 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 ADGRB1O14514 1584 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 HDAC3O15379 428 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 TRIM3O75382 744 aaPredicted RBP8.46□□□□□ -1.05
ABCA4-201ENST00000370225 STK16O75716 305 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 POU2F1P14859 743 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 VPS26BQ4G0F5 336 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 GCNT6Q5T4J0 391 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 VWA5B1Q5TIE3 1220 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 FRRS1Q6ZNA5 592 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 GRASPQ7Z6J2 395 aaPredicted RBP8.46□□□□□ -1.05
ABCA4-201ENST00000370225 DNAJB7Q7Z6W7 309 aaPredicted RBP8.46□□□□□ -1.05
ABCA4-201ENST00000370225 OR7A2PQ8NGA2 310 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 MFSD3Q96ES6 412 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 TRMT61BQ9BVS5 477 aaKnown RBP8.46□□□□□ -1.05
ABCA4-201ENST00000370225 TAPBPLQ9BX59 468 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 SAR1AQ9NR31 198 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 PHF24Q9UPV7 400 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 ARVCFO00192 962 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 TNFRSF21O75509 655 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 PDHA2P29803 388 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 CHIT1Q13231 466 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 NOMO1Q15155 1222 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 KCTD8Q6ZWB6 473 aa8.46□□□□□ -1.05
ABCA4-201ENST00000370225 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms