RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ARMC10Q8N2F6 343 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZNF557Q8N988 423 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 OR10A6Q8NH74 314 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 RDH11Q8TC12 318 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 YTHDF1Q9BYJ9 559 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZNF700Q9H0M5 742 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 DPAGT1Q9H3H5 408 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 AHSPQ9NZD4 102 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TRHDEQ9UKU6 1024 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MGAT4AQ9UM21 535 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TNPO3Q9Y5L0 923 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 NCANO14594 1321 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 hCG_1818297A0A087WSY0 165 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 NR2F1P10589 423 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 ENDOUP21128 410 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 PCSK1P29120 753 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CCR4P51679 360 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 EIF5AP63241 154 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 EIF5AL1Q6IS14 154 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 SMIM5Q71RC9 77 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 COMMD7Q86VX2 200 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 TICAM1Q8IUC6 712 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 OR7G2Q8NG99 324 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 EDEM1Q92611 657 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 SERAC1Q96JX3 654 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 RSPH9Q9H1X1 276 aaPredicted RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 DDX43Q9NXZ2 648 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 SUCOQ9UBS9 1254 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 TSPAN16Q9UKR8 245 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 ANGPT4Q9Y264 503 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 MYO5AQ9Y4I1 1855 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 TISP43B9A030 160 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 DHX15O43143 795 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 ACSL4O60488 711 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 BBOX1O75936 387 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 SLITRK5O94991 958 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CYP1A2P05177 515 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 FCER2P06734 321 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CD72P21854 359 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 POLR2JP52435 117 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 BTN1A1Q13410 526 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 IKBKEQ14164 716 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 KRBOX4Q5JUW0 171 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 HECTD3Q5T447 861 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 ZDHHC21Q8IVQ6 265 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CHST4Q8NCG5 386 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 SPATA20Q8TB22 786 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 RIT1Q92963 219 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 TBL1YQ9BQ87 522 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 MXRA8Q9BRK3 442 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 KIAA1257Q9ULG3 409 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 ICMTO60725 284 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 ABCB7O75027 752 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CYBBP04839 570 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CHRNB1P11230 501 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 CD86P42081 329 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 LRP8Q14114 963 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 SPRED3Q2MJR0 410 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 FBXO48Q5FWF7 155 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 ZNF773Q6PK81 442 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 DDX53Q86TM3 631 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 SLC15A3Q8IY34 581 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 BANPQ8N9N5 519 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 GPR156Q8NFN8 814 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 OR5H6Q8NGV6 325 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 PEX13Q92968 403 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 PIWIL1Q96J94 861 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 SNX27Q96L92 541 aa8.49□□□□□ -1.05
LCA5-201ENST00000369846 TEFMQ96QE5 360 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 TLR8Q9NR97 1041 aaKnown RBP8.49□□□□□ -1.05
LCA5-201ENST00000369846 AFDNP55196 1824 aaKnown RBP8.48□□□□□ -1.05
LCA5-201ENST00000369846 HTRA2O43464 458 aaPredicted RBP8.48□□□□□ -1.05
LCA5-201ENST00000369846 CHST10O43529 356 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 KLRC4O43908 158 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 TULP3O75386 442 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 SNAP29O95721 258 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 PROS1P07225 676 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 ZNF7P17097 686 aaPredicted RBP8.48□□□□□ -1.05
LCA5-201ENST00000369846 TYMPP19971 482 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 CSTF2P33240 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
LCA5-201ENST00000369846 BUD31P41223 144 aaPredicted RBP8.48□□□□□ -1.05
LCA5-201ENST00000369846 CDH12P55289 794 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 DEFA6Q01524 100 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 FGL2Q14314 439 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 RHEBQ15382 184 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 CRY1Q16526 586 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 C11orf91Q3C1V1 193 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 PCID2Q5JVF3 399 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 PLEKHG7Q6ZR37 379 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 FBXL16Q8N461 479 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 OR7G1Q8NGA0 311 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 DNAJA4Q8WW22 397 aaPredicted RBP8.48□□□□□ -1.05
LCA5-201ENST00000369846 CGRRF1Q99675 332 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 ZNF649Q9BS31 505 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 ARL6Q9H0F7 186 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 PRDM12Q9H4Q4 367 aa8.48□□□□□ -1.05
LCA5-201ENST00000369846 SOX17Q9H6I2 414 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms