RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ZNF648Q5T619 568 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 AGBL4Q5VU57 503 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 ZNF776Q68DI1 518 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 CCDC121Q6ZUS5 278 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 Q7L0L9 218 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 WDR75Q8IWA0 830 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 PELI3Q8N2H9 469 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 PTGR2Q8N8N7 351 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 CCT6BQ92526 530 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 GLYATL1Q969I3 302 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 FUBP1Q96AE4 644 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 VPS35Q96QK1 796 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 PANX3Q96QZ0 392 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 GABRG3Q99928 467 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 SERGEFQ9UGK8 458 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 DOCK9Q9BZ29 2069 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 CFAP99D6REC4 459 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 INPP4BO15327 924 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 NPHS1O60500 1241 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 ADAM23O75077 832 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 TPBGLP0DKB5 382 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 HOXB2P14652 356 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 MSH3P20585 1137 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 DRD1P21728 446 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 RGS4P49798 205 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 COPAP53621 1224 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 GRSF1Q12849 480 aaKnown RBP eCLIP16.58■□□□□ 0.24
PHGDH-202ENST00000369409 ACSBG2Q5FVE4 666 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 SDE2Q6IQ49 451 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 RPS27LQ71UM5 84 aaKnown RBP16.58■□□□□ 0.24
PHGDH-202ENST00000369409 RAVER1Q8IY67 606 aaKnown RBP16.58■□□□□ 0.24
PHGDH-202ENST00000369409 HDDC3Q8N4P3 179 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 FITM2Q8N6M3 262 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 OR2T3Q8NH03 318 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 BTN2A2Q8WVV5 523 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 SHCBP1LQ9BZQ2 653 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 KCNK4Q9NYG8 393 aa16.58■□□□□ 0.24
PHGDH-202ENST00000369409 A0A1W2PP55 124 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 MAGEC1O60732 1142 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 DCTN3O75935 186 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 SOD1P00441 154 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 GFAPP14136 432 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 COL9A1P20849 921 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 C5AR1P21730 350 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 RPS14P62263 151 aaKnown RBP16.57■□□□□ 0.24
PHGDH-202ENST00000369409 TTLL9Q3SXZ7 439 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-202ENST00000369409 ZNF765Q7L2R6 523 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 LSMEM2Q8N112 164 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 PDLIM5Q96HC4 596 aaKnown RBP16.57■□□□□ 0.24
PHGDH-202ENST00000369409 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-202ENST00000369409 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
PHGDH-202ENST00000369409 RAP2CQ9Y3L5 183 aa16.57■□□□□ 0.24
PHGDH-202ENST00000369409 SYCE1LA8MT33 242 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 K7ESM1 405 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 DGKAP23743 735 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 TAS2R38P59533 333 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 HERVK_113P63132 956 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 PFKFB4Q16877 469 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 SPRED3Q2MJR0 410 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 LDLRAP1Q5SW96 308 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 ZNF678Q5SXM1 525 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 RAET1GQ6H3X3 334 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 MAVSQ7Z434 540 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 YTHDF3Q7Z739 585 aaKnown RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 PHYKPLQ8IUZ5 450 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 MYO1HQ8N1T3 1032 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 L3HYPDHQ96EM0 354 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 ERVK-6Q9BXR3 956 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 ILKAPQ9H0C8 392 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 SLC6A17Q9H1V8 727 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 KCTD5Q9NXV2 234 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 NCF1BA6NI72 391 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 OR2AG2A6NM03 316 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 NCF1CA8MVU1 366 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 ANKRD65E5RJM6 399 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 RNASEH2AO75792 299 aaKnown RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 NCF1P14598 390 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 FOSL2P15408 326 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 IMPDH1P20839 514 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 CCR7P32248 378 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 CREB5Q02930 508 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 PRKAA1Q13131 559 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 SMAD2Q15796 467 aaKnown RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 HSF5Q4G112 596 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 FRMD7Q6ZUT3 714 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 RAB44Q7Z6P3 723 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-202ENST00000369409 ADAMTSL2Q86TH1 951 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 FBXO39Q8N4B4 442 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 ERP27Q96DN0 273 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 EBF4Q9BQW3 602 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 SIKE1Q9BRV8 207 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 WWP1Q9H0M0 922 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 MYLK2Q9H1R3 596 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 GSTO2Q9H4Y5 243 aa16.56■□□□□ 0.24
PHGDH-202ENST00000369409 A0A1W2PQF6 199 aa16.55■□□□□ 0.24
PHGDH-202ENST00000369409 LRRC14BA6NHZ5 514 aa16.55■□□□□ 0.24
PHGDH-202ENST00000369409 AP1G1O43747 822 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms