RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 EEF1AKMT1Q8WVE0 214 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 LINGO1Q96FE5 620 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 PDLIM5Q96HC4 596 aaKnown RBP23.57■■□□□ 1.36
SNX3-203ENST00000368979 PITPNM3Q9BZ71 974 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 ALG9Q9H6U8 611 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 LTB4R2Q9NPC1 389 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 IKZF3Q9UKT9 509 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 MRPS17Q9Y2R5 130 aaKnown RBP23.57■■□□□ 1.36
SNX3-203ENST00000368979 PRUNE2Q8WUY3 3088 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 DLX3O60479 287 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 SERPINE1P05121 402 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 RPS21P63220 83 aaKnown RBP23.56■■□□□ 1.36
SNX3-203ENST00000368979 SFSWAPQ12872 951 aaKnown RBP23.56■■□□□ 1.36
SNX3-203ENST00000368979 TMEM259Q4ZIN3 620 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 ZNF648Q5T619 568 aaPredicted RBP23.56■■□□□ 1.36
SNX3-203ENST00000368979 CGB2Q6NT52 195 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 KIAA1324Q6UXG2 1013 aaKnown RBP23.56■■□□□ 1.36
SNX3-203ENST00000368979 DET1Q7L5Y6 550 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 KIAA1191Q96A73 305 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 LMAN1LQ9HAT1 526 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 PREBQ9HCU5 417 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 THEGQ9P2T0 379 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 NCKAP1Q9Y2A7 1128 aa23.56■■□□□ 1.36
SNX3-203ENST00000368979 CCDC189A1A4V9 331 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 QSOX1O00391 747 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 MAGEC1O60732 1142 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 TRIM13O60858 407 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 SNNO75324 88 aaPredicted RBP23.55■■□□□ 1.36
SNX3-203ENST00000368979 ACADMP11310 421 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 KCNC1P48547 511 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 PRKAA2P54646 552 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 FZD5Q13467 585 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 FGL2Q14314 439 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 OR4D1Q15615 310 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 WSCD2Q2TBF2 565 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 LIPMQ5VYY2 423 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 ADAMTSL4Q6UY14 1074 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 OTOAQ7RTW8 1153 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 PLA2G15Q8NCC3 412 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 SGF29Q96ES7 293 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 SHDQ96IW2 340 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 TSSK1BQ9BXA7 367 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 C1QTNF2Q9BXJ5 285 aa23.55■■□□□ 1.36
SNX3-203ENST00000368979 ATP5F1P24539 256 aaPredicted RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 GRK2P25098 689 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 OCRLQ01968 901 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 TMEM115Q12893 351 aaPredicted RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 STX3Q13277 289 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 PNCKQ6P2M8 343 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 SYT13Q7L8C5 426 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 RASGEF1AQ8N9B8 481 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 PPP1R14CQ8TAE6 165 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 SREK1Q8WXA9 508 aaKnown RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 ATOH8Q96SQ7 321 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 KDM4CQ9H3R0 1056 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 POLMQ9NP87 494 aaPredicted RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 CD93Q9NPY3 652 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 FBXL21Q9UKT6 434 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 A0A1W2PQU0 124 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 KANSL1LA0AUZ9 987 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 F8W8V4 182 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 KERAO60938 352 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 RNGTTO60942 597 aaKnown RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 H2AFYO75367 372 aaKnown RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 DGKAP23743 735 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 CCR7P32248 378 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 DGKEP52429 567 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 MAP7D1Q3KQU3 841 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 TTLL9Q3SXZ7 439 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 NEK5Q6P3R8 708 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 PIGWQ7Z7B1 504 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 TP53I13Q8NBR0 393 aaPredicted RBP23.54■■□□□ 1.36
SNX3-203ENST00000368979 COX14Q96I36 57 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 C7orf26Q96N11 449 aa23.54■■□□□ 1.36
SNX3-203ENST00000368979 NPEPPSL1A6NEC2 478 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 CDC7O00311 574 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 AOAHP28039 575 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 TEAD1P28347 426 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 PRLHRP49683 370 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 RGS4P49798 205 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 TPMTP51580 245 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 CTSCP53634 463 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 GAS6Q14393 721 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 GBX1Q14549 363 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 UBXN2BQ14CS0 331 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 TSNQ15631 228 aaKnown RBP23.53■■□□□ 1.36
SNX3-203ENST00000368979 ACSBG2Q5FVE4 666 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 TRIM74Q86UV6 250 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 HORMAD1Q86X24 394 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 STAG3L4Q8TBR4 150 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 GRAMD1AQ96CP6 724 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 CCDC126Q96EE4 140 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 GATA5Q9BWX5 397 aaPredicted RBP23.53■■□□□ 1.36
SNX3-203ENST00000368979 OSBPL6Q9BZF3 934 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 ZCCHC2Q9C0B9 1178 aaKnown RBP23.53■■□□□ 1.36
SNX3-203ENST00000368979 C20orf27Q9GZN8 174 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 EPHX3Q9H6B9 360 aa23.53■■□□□ 1.36
SNX3-203ENST00000368979 NEMP2A6NFY4 417 aa23.52■■□□□ 1.36
SNX3-203ENST00000368979 OR2AG2A6NM03 316 aa23.52■■□□□ 1.36
SNX3-203ENST00000368979 A8MT66 165 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms