RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C2orf16Q68DN1 1984 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CCDC195A0A1B0GUA6 201 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 MOSPD3O75425 235 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 PMPCBO75439 489 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 C1QAP02745 245 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SERPINF2P08697 491 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 COL6A2P12110 1019 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TDGF1P13385 188 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ENPP1P22413 925 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CNTFP26441 200 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 MDH1P40925 334 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 CD86P42081 329 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 KIR3DL1P43629 444 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SERPINB9P50453 376 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 WNT3AP56704 352 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CRADDP78560 199 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 OLIG2Q13516 323 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 LAPTM5Q13571 262 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SLC12A1Q13621 1099 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SLC5A9Q2M3M2 681 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 PCID2Q5JVF3 399 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 KDELC1Q6UW63 502 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 RANBP10Q6VN20 620 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ZNF852Q6ZMS4 543 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 MARK2Q7KZI7 788 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 PRPF39Q86UA1 669 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 BBS7Q8IWZ6 715 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SRRM1Q8IYB3 904 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 PPHLN1Q8NEY8 458 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 SH3RF2Q8TEC5 729 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 DDI1Q8WTU0 396 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 EZH1Q92800 747 aaPredicted RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 OTUB2Q96DC9 234 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 MTBPQ96DY7 904 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TCEAL4Q96EI5 215 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SMC6Q96SB8 1091 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 KIFC1Q9BW19 673 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 KIF9Q9HAQ2 790 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 PIH1D1Q9NWS0 290 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 EDARQ9UNE0 448 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 DGKBQ9Y6T7 804 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ANKRD36A6QL64 1941 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 VCANP13611 3396 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 TRBV23OR9-2A0A075B6M9 112 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 C7orf72A4D263 438 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FAM170BA6NMN3 283 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FAM227AF5H4B4 570 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 KRT38O76015 456 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 EPOP01588 193 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 MMP2P08253 660 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 BRAFP15056 766 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SP100P23497 879 aaPredicted RBP8.74□□□□□ -1.01
TPM3-213ENST00000368545 DPP6P42658 865 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SLC18A1P54219 525 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 MAXP61244 160 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 DSC2Q02487 901 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 NIPAL4Q0D2K0 466 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 HTR4Q13639 388 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 LAMB3Q13751 1172 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 GRASPQ7Z6J2 395 aaPredicted RBP8.74□□□□□ -1.01
TPM3-213ENST00000368545 PGBD5Q8N414 524 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 PPM1NQ8N819 430 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 ARRDC2Q8TBH0 407 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SMG7Q92540 1137 aaKnown RBP8.74□□□□□ -1.01
TPM3-213ENST00000368545 CENPTQ96BT3 561 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 ZNF707Q96C28 371 aaPredicted RBP8.74□□□□□ -1.01
TPM3-213ENST00000368545 MVB12AQ96EY5 273 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 CERS2Q96G23 380 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FEM1CQ96JP0 617 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 PTCHD1Q96NR3 888 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 APOL2Q9BQE5 337 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 TRABDQ9H4I3 376 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 VPS28Q9UK41 221 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FAM169AQ9Y6X4 670 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SLC9A3R1O14745 358 aaPredicted RBP8.74□□□□□ -1.01
TPM3-213ENST00000368545 PRPF4O43172 522 aaKnown RBP eCLIP8.74□□□□□ -1.01
TPM3-213ENST00000368545 FGF1P05230 155 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 HLA-DPA1P20036 260 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 GNGT1P63211 74 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 ARF5P84085 180 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 MGAT5Q09328 741 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SLC1A5Q15758 541 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 ZNF77Q15935 545 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 ANKRD20A4Q4UJ75 823 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 RALGPS1Q5JS13 557 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 CERCAMQ5T4B2 595 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FYB2Q5VWT5 728 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 USP45Q70EL2 814 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FAM214BQ7L5A3 538 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 WDR5BQ86VZ2 330 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.74□□□□□ -1.01
TPM3-213ENST00000368545 FIBINQ8TAL6 211 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 USP13Q92995 863 aaPredicted RBP8.74□□□□□ -1.01
TPM3-213ENST00000368545 RANBP9Q96S59 729 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SEMA3CQ99985 751 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 FEM1AQ9BSK4 669 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 SLC32A1Q9H598 525 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 PPANQ9NQ55 473 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms