RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SPINK2P20155 84 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 PMLP29590 882 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 FNBP1LQ5T0N5 605 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 AFTPHQ6ULP2 937 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 RAB44Q7Z6P3 723 aaPredicted RBP14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 OR6P1Q8NGX9 317 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 ADAMTS14Q8WXS8 1223 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 PEX13Q92968 403 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 GLMNQ92990 594 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 PWWP2AQ96N64 755 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 COPS8Q99627 209 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 LRRC1Q9BTT6 524 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 ANKZF1Q9H8Y5 726 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 MRM3Q9HC36 420 aaKnown RBP14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZDHHC3Q9NYG2 299 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 RABGEF1Q9UJ41 708 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 WASF3Q9UPY6 502 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 PCDHGA1Q9Y5H4 931 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 GOLGA4Q13439 2230 aaKnown RBP14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 TP73O15350 636 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 SNX2O60749 519 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 ARNTP27540 789 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 PBLDP30039 288 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 DUSP3P51452 185 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 PRAMEP78395 509 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 SLC7A5Q01650 507 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 HLTFQ14527 1009 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 C14orf28Q4W4Y0 310 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 C17orf82Q86X59 251 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 OR4L1Q8NH43 312 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 SIGLEC10Q96LC7 697 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 TIMM29Q9BSF4 260 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 OSGEPL1Q9H4B0 414 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 MARCH4Q9P2E8 410 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 TRBV23OR9-2A0A075B6M9 112 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 A6NCN8 305 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 SEC31AO94979 1220 aaKnown RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 RPL21P46778 160 aaKnown RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 RPIAP49247 311 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 MSS51Q4VC12 460 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 CASC4Q6P4E1 433 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 XKR5Q6UX68 686 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 FAM83HQ6ZRV2 1179 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 LDB1Q86U70 411 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 HOOK3Q86VS8 718 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 MARCH9Q86YJ5 346 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 CLDN19Q8N6F1 224 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 CCDC74AQ96AQ1 378 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 DCUN1D1Q96GG9 259 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 FCRL3Q96P31 734 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 PARD6BQ9BYG5 372 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 PRDM8Q9NQV8 689 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 NCKIPSDQ9NZQ3 722 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 SNX24Q9Y343 169 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 RNF215Q9Y6U7 377 aa14.84□□□□□ -0.03
SMPDL3A-201ENST00000368440 RP1P56715 2156 aa14.83□□□□□ -0.03
SMPDL3A-201ENST00000368440 SDR42E2A6NKP2 422 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 POP7O75817 140 aaKnown RBP14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 CLCNKAP51800 687 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 ITGA8P53708 1063 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 ILKQ13418 452 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 SEPT7Q16181 437 aaKnown RBP14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 HIBCHQ6NVY1 386 aaPredicted RBP14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 C8orf74Q6P047 294 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 PCGF5Q86SE9 256 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 ARL14Q8N4G2 192 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 MMGT1Q8N4V1 131 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 SLC37A2Q8TED4 501 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 SNF8Q96H20 258 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 IL1RAPL1Q9NZN1 696 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 SCHIP1Q9P0W5 487 aaPredicted RBP14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 SAMD15Q9P1V8 674 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 FAM8A1Q9UBU6 413 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 PRSS21Q9Y6M0 314 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 ASXL3Q9C0F0 2248 aa14.83□□□□□ -0.04
SMPDL3A-201ENST00000368440 PIKFYVEQ9Y2I7 2098 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 GOLGA8KD6RF30 607 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 GOLGA8TH3BQL2 631 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 OR1I1O60431 355 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 VAPBO95292 243 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 RALBP11234 206 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 ATP1B2P14415 290 aaPredicted RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 INSM1Q01101 510 aaPredicted RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 DHX9Q08211 1270 aaKnown RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 NFE2L1Q14494 772 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 MORF4L2Q15014 288 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 BCL7AQ4VC05 210 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 SGSM3Q96HU1 749 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 CCDC3Q9BQI4 270 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 DPH5Q9H2P9 285 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 CATSPERZQ9NTU4 200 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 EVA1BQ9NVM1 165 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 KLK13Q9UKR3 277 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 FAM187AA6NFU0 413 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 CFAP99D6REC4 459 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 TRIM16O95361 564 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 GP1BAP07359 652 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 F3P13726 295 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 RPL10P27635 214 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms