RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ALPIP09923 528 aa8.79□□□□□ -1
THBS3-201ENST00000368378 G6PDP11413 515 aa8.79□□□□□ -1
THBS3-201ENST00000368378 COL6A2P12110 1019 aa8.79□□□□□ -1
THBS3-201ENST00000368378 HOXD8P13378 290 aaPredicted RBP8.79□□□□□ -1
THBS3-201ENST00000368378 CD1DP15813 335 aa8.79□□□□□ -1
THBS3-201ENST00000368378 GPX3P22352 226 aa8.79□□□□□ -1
THBS3-201ENST00000368378 VARSP26640 1264 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 AQP1P29972 269 aa8.79□□□□□ -1
THBS3-201ENST00000368378 TGFBR1P36897 503 aa8.79□□□□□ -1
THBS3-201ENST00000368378 MASP1P48740 699 aa8.79□□□□□ -1
THBS3-201ENST00000368378 HSPA7P48741 367 aa8.79□□□□□ -1
THBS3-201ENST00000368378 CLK1P49759 484 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 SPIDRQ14159 915 aa8.79□□□□□ -1
THBS3-201ENST00000368378 SF1Q15637 639 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 SMUG1Q53HV7 270 aa8.79□□□□□ -1
THBS3-201ENST00000368378 FAM171A1Q5VUB5 890 aa8.79□□□□□ -1
THBS3-201ENST00000368378 ERMP1Q7Z2K6 904 aa8.79□□□□□ -1
THBS3-201ENST00000368378 SYVN1Q86TM6 617 aa8.79□□□□□ -1
THBS3-201ENST00000368378 DENND1CQ8IV53 801 aa8.79□□□□□ -1
THBS3-201ENST00000368378 RNF175Q8N4F7 328 aa8.79□□□□□ -1
THBS3-201ENST00000368378 RTL3Q8N8U3 475 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 CALML6Q8TD86 181 aa8.79□□□□□ -1
THBS3-201ENST00000368378 PGAP3Q96FM1 320 aaPredicted RBP8.79□□□□□ -1
THBS3-201ENST00000368378 TSPAN17Q96FV3 270 aa8.79□□□□□ -1
THBS3-201ENST00000368378 ZNF597Q96LX8 424 aa8.79□□□□□ -1
THBS3-201ENST00000368378 MEAF6Q9HAF1 191 aa8.79□□□□□ -1
THBS3-201ENST00000368378 HPS4Q9NQG7 708 aa8.79□□□□□ -1
THBS3-201ENST00000368378 ITM2CQ9NQX7 267 aa8.79□□□□□ -1
THBS3-201ENST00000368378 ABCC13Q9NSE7 274 aa8.79□□□□□ -1
THBS3-201ENST00000368378 NDUFA13Q9P0J0 144 aa8.79□□□□□ -1
THBS3-201ENST00000368378 MARCH2Q9P0N8 246 aa8.79□□□□□ -1
THBS3-201ENST00000368378 GABRQQ9UN88 632 aa8.79□□□□□ -1
THBS3-201ENST00000368378 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
THBS3-201ENST00000368378 NINQ8N4C6 2090 aa8.79□□□□□ -1
THBS3-201ENST00000368378 PRUNE2Q8WUY3 3088 aa8.79□□□□□ -1
THBS3-201ENST00000368378 MANSC4A6NHS7 340 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 AP3B1O00203 1094 aa8.78□□□□□ -1
THBS3-201ENST00000368378 PSMD3O43242 534 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ZNF682O95780 498 aa8.78□□□□□ -1
THBS3-201ENST00000368378 PENKP01210 267 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 ZNF37AP17032 561 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 MATN1P21941 496 aa8.78□□□□□ -1
THBS3-201ENST00000368378 RPS9P46781 194 aaKnown RBP8.78□□□□□ -1
THBS3-201ENST00000368378 HSPA13P48723 471 aa8.78□□□□□ -1
THBS3-201ENST00000368378 HK2P52789 917 aa8.78□□□□□ -1
THBS3-201ENST00000368378 C21orf59P57076 290 aa8.78□□□□□ -1
THBS3-201ENST00000368378 DUSP4Q13115 394 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ACAP2Q15057 778 aa8.78□□□□□ -1
THBS3-201ENST00000368378 CPSF6Q16630 551 aaKnown RBP eCLIP8.78□□□□□ -1
THBS3-201ENST00000368378 UPP1Q16831 310 aa8.78□□□□□ -1
THBS3-201ENST00000368378 UAP1L1Q3KQV9 507 aa8.78□□□□□ -1
THBS3-201ENST00000368378 MS4A13Q5J8X5 152 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ANKS6Q68DC2 871 aa8.78□□□□□ -1
THBS3-201ENST00000368378 KIAA0930Q6ICG6 404 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 MRNIPQ6NTE8 343 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ENPP6Q6UWR7 440 aa8.78□□□□□ -1
THBS3-201ENST00000368378 FAM151BQ6UXP7 276 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 PATL1Q86TB9 770 aaKnown RBP8.78□□□□□ -1
THBS3-201ENST00000368378 CARM1Q86X55 608 aa8.78□□□□□ -1
THBS3-201ENST00000368378 TICAM1Q8IUC6 712 aa8.78□□□□□ -1
THBS3-201ENST00000368378 KIAA2013Q8IYS2 634 aa8.78□□□□□ -1
THBS3-201ENST00000368378 TMEM86AQ8N2M4 240 aa8.78□□□□□ -1
THBS3-201ENST00000368378 KRTCAP2Q8N6L1 136 aa8.78□□□□□ -1
THBS3-201ENST00000368378 TMCO5AQ8N6Q1 288 aa8.78□□□□□ -1
THBS3-201ENST00000368378 OR2T11Q8NH01 316 aa8.78□□□□□ -1
THBS3-201ENST00000368378 NCSTNQ92542 709 aa8.78□□□□□ -1
THBS3-201ENST00000368378 PYCR2Q96C36 320 aa8.78□□□□□ -1
THBS3-201ENST00000368378 NSMCE2Q96MF7 247 aa8.78□□□□□ -1
THBS3-201ENST00000368378 FAM193BQ96PV7 902 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 IL12RB2Q99665 862 aa8.78□□□□□ -1
THBS3-201ENST00000368378 PRDM5Q9NQX1 630 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 IFT80Q9P2H3 777 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 ANAPC2Q9UJX6 822 aa8.78□□□□□ -1
THBS3-201ENST00000368378 CNTRLQ7Z7A1 2325 aa8.78□□□□□ -1
THBS3-201ENST00000368378 A0A087WXM4 84 aa8.78□□□□□ -1
THBS3-201ENST00000368378 TMEM221A6NGB7 291 aa8.78□□□□□ -1
THBS3-201ENST00000368378 C1QCP02747 245 aa8.78□□□□□ -1
THBS3-201ENST00000368378 CYBBP04839 570 aa8.78□□□□□ -1
THBS3-201ENST00000368378 OCM2P0CE71 109 aa8.78□□□□□ -1
THBS3-201ENST00000368378 OCMP0CE72 109 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 RXRGP48443 463 aa8.78□□□□□ -1
THBS3-201ENST00000368378 CLCN5P51795 746 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ADAM17P78536 824 aa8.78□□□□□ -1
THBS3-201ENST00000368378 SREBF2Q12772 1141 aa8.78□□□□□ -1
THBS3-201ENST00000368378 DNASE1L3Q13609 305 aa8.78□□□□□ -1
THBS3-201ENST00000368378 APOFQ13790 326 aa8.78□□□□□ -1
THBS3-201ENST00000368378 NR1D2Q14995 579 aa8.78□□□□□ -1
THBS3-201ENST00000368378 PCBP1Q15365 356 aaKnown RBP eCLIP8.78□□□□□ -1
THBS3-201ENST00000368378 SKIV2LQ15477 1246 aaKnown RBP8.78□□□□□ -1
THBS3-201ENST00000368378 ATXN7L2Q5T6C5 722 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 NANOGP8Q6NSW7 305 aa8.78□□□□□ -1
THBS3-201ENST00000368378 DET1Q7L5Y6 550 aa8.78□□□□□ -1
THBS3-201ENST00000368378 ST13P5Q8NFI4 369 aaPredicted RBP8.78□□□□□ -1
THBS3-201ENST00000368378 ITFG1Q8TB96 612 aa8.78□□□□□ -1
THBS3-201ENST00000368378 TFAP2CQ92754 450 aa8.78□□□□□ -1
THBS3-201ENST00000368378 FAM162AQ96A26 154 aa8.78□□□□□ -1
THBS3-201ENST00000368378 BIRC7Q96CA5 298 aa8.78□□□□□ -1
THBS3-201ENST00000368378 PARK7Q99497 189 aaKnown RBP8.78□□□□□ -1
THBS3-201ENST00000368378 RHNO1Q9BSD3 238 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms