RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CITO14578 2027 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 H0YGN5 161 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 UROSP10746 265 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CSF2RAP15509 400 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ERVK-21P61565 698 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CLDN10P78369 228 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 HTRA3P83110 453 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 GHRHRQ02643 423 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 SLC10A2Q12908 348 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CHST15Q7LFX5 561 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 TCAIMQ8N3R3 496 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 BEND7Q8N7W2 519 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 BPIFB6Q8NFQ5 453 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ZFP28Q8NHY6 868 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 REXO5Q96IC2 774 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 HOPXQ9BPY8 73 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 RPL26L1Q9UNX3 145 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 COPG1Q9Y678 874 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 NFS1Q9Y697 457 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 A0A087WXM4 84 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 EME2A4GXA9 379 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 EFNA1P20827 205 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 RPL3P39023 403 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 MAGEA11P43364 429 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 C1DQ13901 141 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 SLC9B1Q4ZJI4 515 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 GPAT3Q53EU6 434 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ANKRD46Q86W74 232 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF655Q8N720 491 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 C10orf82Q8WW14 230 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CADM1Q9BY67 442 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 VPS4AQ9UN37 437 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 TPRKBQ9Y3C4 175 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ANKRD66B4E2M5 251 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 SOD2P04179 222 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 NEK2P51955 445 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 MANFP55145 182 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF252P-AS1Q0IIN9 211 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 PITRM1Q5JRX3 1037 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 R3HCC1LQ7Z5L2 792 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 OFCC1Q8IZS5 231 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 TMCO5AQ8N6Q1 288 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 OR2AP1Q8NGE2 309 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 SAMHD1Q9Y3Z3 626 aaKnown RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 BBIP1A8MTZ0 92 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 NPHS1O60500 1241 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CLDN7O95471 211 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 IDSP22304 550 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 KELP23276 732 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 TTC23Q5W5X9 447 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 GLYATQ6IB77 296 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 AAGABQ6PD74 315 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CHSY3Q70JA7 882 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CHMP1BQ7LBR1 199 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 GRASPQ7Z6J2 395 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-203ENST00000368207 AADATQ8N5Z0 425 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CDK15Q96Q40 435 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 TDP1Q9NUW8 608 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 ADGRE2Q9UHX3 823 aa12.18□□□□□ -0.46
PTPRK-203ENST00000368207 CAPN8A6NHC0 703 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 UMPSP11172 480 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CYBAP13498 195 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 VITQ6UXI7 678 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 C16orf62Q7Z3J2 963 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 SNX20Q7Z614 316 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 TP53INP2Q8IXH6 220 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 RERGQ96A58 199 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CIB1Q99828 191 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 AIF1LQ9BQI0 150 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 OSBPL6Q9BZF3 934 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 OR2AG1Q9H205 316 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 RAB23Q9ULC3 237 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 NDRG2Q9UN36 371 aaKnown RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ANGPT4Q9Y264 503 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 TMEM233B4DJY2 109 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 OR10H2O60403 315 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CHN2P52757 468 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CHRNA6Q15825 494 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF605Q86T29 641 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CNTD1Q8N815 330 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 SNRNP27Q8WVK2 155 aaKnown RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 OXSMQ9NWU1 459 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 AP4B1Q9Y6B7 739 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 AK5Q9Y6K8 562 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 DLX3O60479 287 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CAPN15O75808 1086 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 KRT75O95678 551 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ANXA4P09525 319 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 GKP32189 559 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms