RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 HGH1Q9BTY7 390 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 SDR39U1Q9NRG7 319 aaPredicted RBP13.86□□□□□ -0.19
USF1-202ENST00000368020 GID8Q9NWU2 228 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 ADA2Q9NZK5 511 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 SLC25A13Q9UJS0 675 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 HS3ST2Q9Y278 367 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 HCFC2Q9Y5Z7 792 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 GLYATL1P3A0A0U1RQE8 302 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 DYTNA2CJ06 578 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 H3BNX3 289 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 LEFTY2O00292 366 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 MT-CO1P00395 513 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 POU3F3P20264 500 aaPredicted RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 GPX3P22352 226 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 NFKBIAP25963 317 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 ACRV1P26436 265 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 ZXDBP98169 803 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 KCNC3Q14003 757 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 DMC1Q14565 340 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 TGFBIQ15582 683 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 IRAK1BP1Q5VVH5 260 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 TTC23LQ6PF05 361 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 GPRIN3Q6ZVF9 776 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 SERPINA9Q86WD7 417 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 PDSS2Q86YH6 399 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 CAMK1DQ8IU85 385 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 CPNE9Q8IYJ1 553 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 MYO1HQ8N1T3 1032 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 PCDH20Q8N6Y1 951 aaKnown RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 LEMD2Q8NC56 503 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 LRGUKQ96M69 825 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 ZNF641Q96N77 438 aaPredicted RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 CPEB1Q9BZB8 566 aaKnown RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 Q9H521 79 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 ASB8Q9H765 288 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 SEMA4BQ9NPR2 832 aaPredicted RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 EVLQ9UI08 416 aaPredicted RBP13.85□□□□□ -0.19
USF1-202ENST00000368020 PPIL1Q9Y3C6 166 aa13.85□□□□□ -0.19
USF1-202ENST00000368020 EIF3FO00303 357 aaPredicted RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 PER2O15055 1255 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ANGPT2O15123 496 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CSPG5O95196 566 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 PRR35P0CG20 571 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CBSLP0DN79 551 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 XRCC1P18887 633 aaPredicted RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 TSPAN8P19075 237 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CBSP35520 551 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 HSPA13P48723 471 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 TRIP10Q15642 601 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 RBBP7Q16576 425 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ARHGAP15Q53QZ3 475 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 OGFRL1Q5TC84 451 aaPredicted RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 TMEM184AQ6ZMB5 413 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 MACC1Q6ZN28 852 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 TPGS1Q6ZTW0 290 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ADGRD2Q7Z7M1 963 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 PHYKPLQ8IUZ5 450 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 PDPRQ8NCN5 879 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ICA1LQ8NDH6 482 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 BHLHE22Q8NFJ8 381 aaPredicted RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 HMGCLL1Q8TB92 370 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ULK4Q96C45 1275 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 NSUN5Q96P11 429 aaKnown RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 FAM126AQ9BYI3 521 aaPredicted RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 TRIM15Q9C019 465 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 POLG2Q9UHN1 485 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CRLS1Q9UJA2 301 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ATP6AP2A0A1C7CYW4 349 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 K7ERQ8 282 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 RFXAPO00287 272 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 E2F3O00716 465 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 FBP2O00757 339 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ACOT8O14734 319 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 TRIM24O15164 1050 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ATP6AP2O75787 350 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 SMNDC1O75940 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
USF1-202ENST00000368020 SORBS2O94875 1100 aaKnown RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 OTCP00480 354 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ALPIP09923 528 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ALDOCP09972 364 aaKnown RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 HGFP14210 728 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 EPCAMP16422 314 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CTPS1P17812 591 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 NRIP1P48552 1158 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CLCN2P51788 898 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 XKR7Q5GH72 579 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 PITRM1Q5JRX3 1037 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CDKL4Q5MAI5 379 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 C8orf82Q6P1X6 216 aaPredicted RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 FAM151BQ6UXP7 276 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 TPRG1Q6ZUI0 275 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 RBM23Q86U06 439 aaKnown RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 PLPP6Q8IY26 295 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 GOLM1Q8NBJ4 401 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 HIPK4Q8NE63 616 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 ADCY4Q8NFM4 1077 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 C3orf30Q96M34 536 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms