RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ANXA11P50995 505 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 SLC7A2P52569 658 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 PLK1P53350 603 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 RHDQ02161 417 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CLCQ05315 142 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 KRT33BQ14525 404 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 OCLNQ16625 522 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CXCL17Q6UXB2 119 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 SLC24A5Q71RS6 500 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 MYDGFQ969H8 173 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 DNAJC1Q96KC8 554 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CCDC115Q96NT0 180 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 PRRG3Q9BZD7 231 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 GTF2IRD1Q9UHL9 959 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 GABBR2O75899 941 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 HNRNPLP14866 589 aaKnown RBP eCLIP5.32□□□□□ -1.566e-7■■■■□ 24.4
CDC42BPA-204ENST00000366767 MLLT6P55198 1093 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 UBAP2Q5T6F2 1119 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 RBFAQ8N0V3 343 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NDRG1Q92597 394 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 HDAC2Q92769 488 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 MRPL48Q96GC5 212 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 EBF3Q9H4W6 596 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 PTBP2Q9UKA9 531 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 SCML2Q9UQR0 700 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 INVSQ9Y283 1065 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 A0A088AWK7 358 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 MYL12AP19105 171 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 PSMA3P25788 255 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CREMQ03060 361 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 LCP2Q13094 533 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NDUFAF6Q330K2 333 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 TIGD5Q53EQ6 642 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 ARHGAP15Q53QZ3 475 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CASP12Q6UXS9 341 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 GK5Q6ZS86 529 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 REM2Q8IYK8 340 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF540Q8NDQ6 660 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 MZB1Q8WU39 189 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 IL12RB2Q99665 862 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 C2orf49Q9BVC5 232 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 GSDMCQ9BYG8 508 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 KCNK13Q9HB14 408 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 FADS3Q9Y5Q0 445 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CAPN8A6NHC0 703 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CSPG5O95196 566 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CYP11A1P05108 521 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NELFEP18615 380 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NRLP54845 237 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 TAF1AQ15573 450 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 MAPKAPK3Q16644 382 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 PTPRNQ16849 979 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF549Q6P9A3 640 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 TBC1D19Q8N5T2 526 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 GLB1L3Q8NCI6 653 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 SPATA22Q8NHS9 363 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CENPNQ96H22 339 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 C8orf48Q96LL4 319 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 SEMA4BQ9NPR2 832 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 TMEM45AQ9NWC5 275 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CORO2BQ9UQ03 480 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 COL4A1P02462 1669 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 A0A0U1RQF3 1178 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NCF1BA6NI72 391 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NCF1CA8MVU1 366 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 F8W810 466 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 SNAI1O95863 264 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 LRG1P02750 347 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 C7P10643 843 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 NCF1P14598 390 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 TACR2P21452 398 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 EIF2B5Q13144 721 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 INTS11Q5TA45 600 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 GARNL3Q5VVW2 1013 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 TREML1Q86YW5 311 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 HIPK1Q86Z02 1210 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 MARVELD2Q8N4S9 558 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 ACOX2Q99424 681 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 APOL5Q9BWW9 433 aa5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 RGS17Q9UGC6 210 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-204ENST00000366767 CLDN25C9JDP6 229 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 ASLP04424 464 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF37AP17032 561 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 SERPINA4P29622 427 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 MAGEA11P43364 429 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 PSMD4P55036 377 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 MAZP56270 477 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 HERVK_113P63132 956 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 MPP1Q00013 466 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 PGS1Q32NB8 556 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 KLHDC10Q6PID8 442 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 CRTC3Q6UUV7 619 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 IL27RAQ6UWB1 636 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 MCOLN3Q8TDD5 553 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 AP3S1Q92572 193 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 REPS1Q96D71 796 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 PHF12Q96QT6 1004 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 SMOQ99835 787 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 ERVK-6Q9BXR3 956 aa5.31□□□□□ -1.56
CDC42BPA-204ENST00000366767 CD320Q9NPF0 282 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms