RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ARNTP27540 789 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 BRCC3P46736 316 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 PGGT1BP53609 377 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 HERVK_113P63132 956 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 RCAN2Q14206 197 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 RPS6KA2Q15349 733 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 INAVAQ3KP66 663 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 ZNF470Q6ECI4 717 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 CLEC6AQ6EIG7 209 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 PRSS48Q7RTY5 328 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 SPATA19Q7Z5L4 167 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 PHYKPLQ8IUZ5 450 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 CHDHQ8NE62 594 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-201ENST00000361909 ZFP90Q8TF47 636 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 ZNF566Q969W8 418 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 FAM149B1Q96BN6 582 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 NSMCE2Q96MF7 247 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 SLC2A13Q96QE2 648 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 ERVK-6Q9BXR3 956 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 TREX1Q9NSU2 369 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 PCDHB8Q9UN66 801 aa18.86■□□□□ 0.61
CMTM3-201ENST00000361909 TIMM13Q9Y5L4 95 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-201ENST00000361909 ZNF99A8MXY4 864 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-201ENST00000361909 M0QYT0 321 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 ENO2P09104 434 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-201ENST00000361909 RAP2AP10114 183 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 BMP1P13497 986 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 ADRA1BP35368 520 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TPD52P55327 224 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-201ENST00000361909 KCNK10P57789 538 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 IL18R1Q13478 541 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 HIST2H2ACQ16777 129 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-201ENST00000361909 UGT3A1Q6NUS8 523 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 FAM171BQ6P995 826 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 FAM35AQ86V20 835 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TP53INP2Q8IXH6 220 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 SLC7A5P1Q8MH63 180 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 CLEC4FQ8N1N0 589 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 THEM5Q8N1Q8 247 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 AADATQ8N5Z0 425 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 PJA1Q8NG27 643 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 DPF3Q92784 378 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 BIRC7Q96CA5 298 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 C3orf30Q96M34 536 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 LEF1Q9UJU2 399 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TBX21Q9UL17 535 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 LRFN2Q9ULH4 789 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TET1Q8NFU7 2136 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 ATP6AP2A0A1C7CYW4 349 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 SAGE2PA6NJ88 616 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 ATP6AP2O75787 350 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 CCDC159P0C7I6 412 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 IFITM3Q01628 133 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 KANK2Q63ZY3 851 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TUBA3EQ6PEY2 450 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TBPL2Q6SJ96 375 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 TWIST2Q8WVJ9 160 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 SCLYQ96I15 445 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 CASD1Q96PB1 797 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 NODALQ96S42 347 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 RTP3Q9BQQ7 232 aa18.85■□□□□ 0.61
CMTM3-201ENST00000361909 MN1Q10571 1320 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-201ENST00000361909 HTR1AP08908 422 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 PPP5CP53041 499 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 PAN2Q504Q3 1202 aaKnown RBP18.84■□□□□ 0.61
CMTM3-201ENST00000361909 OVOS1Q6IE37 1185 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 ADCK1Q86TW2 530 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 ZDHHC13Q8IUH4 622 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 SVOPLQ8N434 492 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 PCED1BQ96HM7 432 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 FCRL5Q96RD9 977 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 MED10Q9BTT4 135 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 NTN4Q9HB63 628 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 UGT2A1Q9Y4X1 527 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 PCDHB3Q9Y5E6 796 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 NOX1Q9Y5S8 564 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 DNAJC15Q9Y5T4 150 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 SCN5AQ14524 2016 aa18.84■□□□□ 0.61
CMTM3-201ENST00000361909 MYBPHLA2RUH7 354 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 UPK1AO00322 258 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 AZIN1O14977 448 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 ITGB1P05556 798 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 GSNP06396 782 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 BMP4P12644 408 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 PCMT1P22061 227 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 CCL23P55773 120 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 PHC1P78364 1004 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 TIGD2Q4W5G0 525 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 FAM98BQ52LJ0 330 aaKnown RBP18.83■□□□□ 0.61
CMTM3-201ENST00000361909 OTUD3Q5T2D3 398 aaPredicted RBP18.83■□□□□ 0.61
CMTM3-201ENST00000361909 ESRP1Q6NXG1 681 aaKnown RBP18.83■□□□□ 0.61
CMTM3-201ENST00000361909 CLEC20AQ6ZU45 233 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 PIWIL3Q7Z3Z3 882 aaKnown RBP18.83■□□□□ 0.61
CMTM3-201ENST00000361909 RAB44Q7Z6P3 723 aaPredicted RBP18.83■□□□□ 0.61
CMTM3-201ENST00000361909 NPAS4Q8IUM7 802 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 OR13J1Q8NGT2 312 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 TMBIM1Q969X1 311 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 RNF145Q96MT1 663 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 DGCR6LQ9BY27 220 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 LRRC3Q9BY71 257 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms