RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RTP4Q96DX8 246 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 WDR70Q9NW82 654 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 GIN1Q9NXP7 522 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 TNFRSF21O75509 655 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 NDST3O95803 873 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ALDH2P05091 517 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ITPKAP23677 461 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ATP5C1P36542 298 aaKnown RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ALDH7A1P49419 539 aaKnown RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 RPL26P61254 145 aaKnown RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 FAM91A1Q658Y4 838 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 MAVSQ7Z434 540 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 VPS35Q96QK1 796 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 LRTM1Q9HBL6 345 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 MIEF1Q9NQG6 463 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ITM2CQ9NQX7 267 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 TRPC4Q9UBN4 977 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 HMX2A2RU54 273 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 B4GAT1O43505 415 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 XPNPEP2O43895 674 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ALDH1A2O94788 518 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 RAP2AP10114 183 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 GLDCP23378 1020 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 AGTR2P50052 363 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 TUBA4AP68366 448 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 PGM2L1Q6PCE3 622 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 ARRDC4Q8NCT1 418 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 COQ7Q99807 217 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 MIR1-1HGQ9H1L0 117 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 POLE4Q9NR33 117 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 PHF24Q9UPV7 400 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 GPC6Q9Y625 555 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 IRAK2O43187 625 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ECI2O75521 394 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SLC25A14O95258 325 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SERPINA1P01009 418 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ZNF534Q76KX8 674 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 C19orf18Q8NEA5 215 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 NACC2Q96BF6 587 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ATG10Q9H0Y0 220 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 H2AFY2Q9P0M6 372 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 CXCR6O00574 342 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 PCSK6P29122 969 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 KPNA1P52294 538 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SREBF2Q12772 1141 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 RETSATQ6NUM9 610 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 STK40Q8N2I9 435 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ENKURQ8TC29 256 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 KBTBD7Q8WVZ9 684 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 NSMCE3Q96MG7 304 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 OLFM1Q99784 485 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 A0A1B0GUL6 1792 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 PENKP01210 267 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 GDF5P43026 501 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 GPR15P49685 360 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 MRPS6P82932 125 aaKnown RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SOX4Q06945 474 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 NCF4Q15080 339 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 RFX4Q33E94 735 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 POM121L1PQ3SYA9 428 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 LIX1Q8N485 282 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SLC13A3Q8WWT9 602 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 CIPCQ9C0C6 399 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-201ENST00000361866 LOC110117498-PIK3R3F6TDL0 507 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 FUT4P22083 530 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ADAM17P78536 824 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 DUSP4Q13115 394 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 TAB1Q15750 504 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 DENND5AQ6IQ26 1287 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 CYS1Q717R9 158 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 HID1Q8IV36 788 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 CGREF1Q99674 301 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
COL6A1-201ENST00000361866 CROCCQ5TZA2 2017 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 A0A1W2PP18 115 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 C7orf72A4D263 438 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 CDK14O94921 469 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 PFKMP08237 780 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 RHOQP17081 205 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 WARSP23381 471 aaKnown RBP13.74□□□□□ -0.21
COL6A1-201ENST00000361866 PMS2P3Q13401 168 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 PHKG1Q16816 387 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 SIRPB2Q5JXA9 342 aa13.74□□□□□ -0.21
COL6A1-201ENST00000361866 GPRIN1Q7Z2K8 1008 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms