RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 AURKAO14965 403 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 RNASEH2AO75792 299 aaKnown RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 GOT2P00505 430 aaKnown RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 IL7RP16871 459 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 RFX3P48380 749 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 DEF8Q6ZN54 512 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 VN1R5Q7Z5H4 357 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 ITIH1P19827 911 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 ELK4P28324 431 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 RORCP51449 518 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 TSSK3Q96PN8 268 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 TEFMQ96QE5 360 aaKnown RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 SLC22A4Q9H015 551 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 CCRL2O00421 344 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 SNNO75324 88 aaPredicted RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 RSL1D1O76021 490 aaKnown RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 SMG8Q8ND04 991 aaKnown RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 CLEC4CQ8WTT0 213 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 STYXQ8WUJ0 223 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 SLC13A3Q8WWT9 602 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 BBS4Q96RK4 519 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 FNDC11Q9BVV2 318 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 IPPKQ9H8X2 491 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 MED1Q15648 1581 aaPredicted RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 RASAL1O95294 804 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 PKMP14618 531 aaKnown RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 PROZP22891 400 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 AQP1P29972 269 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 HSPA14Q0VDF9 509 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CAND1Q86VP6 1230 aaKnown RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 GPR156Q8NFN8 814 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 GAD1Q99259 594 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 SPEF1Q9Y4P9 236 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 PRKD3O94806 890 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ICAM3P32942 547 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 TUBA1BP68363 451 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CYP20A1Q6UW02 462 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 RASSF6Q6ZTQ3 369 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 TUBA1AQ71U36 451 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 ZNF614Q8N883 585 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 SIGLEC10Q96LC7 697 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 IRF2BPLQ9H1B7 796 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 EXD2Q9NVH0 621 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ZNF541Q9H0D2 1346 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 K7EPI3 171 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 KLHL18O94889 574 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 EEF1AKMT1Q8WVE0 214 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 RGS20O76081 388 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 PIGRP01833 764 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 HTR7P34969 479 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 KIR3DL1P43629 444 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ATP4BP51164 291 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ERVK-8P63133 956 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CYP4F8P98187 520 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 MEP1AQ16819 746 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CPTPQ5TA50 214 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CHSY3Q70JA7 882 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CXXC5Q7LFL8 322 aaKnown RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 R3HCC1LQ7Z5L2 792 aaKnown RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 DCBLD1Q8N8Z6 715 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 TBATAQ96M53 351 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 SLC25A51Q9H1U9 297 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ITM2BQ9Y287 266 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 ANKDD1BA6NHY2 528 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 E9PAM4 449 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 PLSCR1O15162 318 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 YES1P07947 543 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 GSK3BP49841 420 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 MVKQ03426 396 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 USP45Q70EL2 814 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 TRUB1Q8WWH5 349 aaKnown RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 ATL1Q8WXF7 558 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 USP7Q93009 1102 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 EMID1Q96A84 441 aaPredicted RBP13.81□□□□□ -0.2
SMC5-201ENST00000361138 CMTM6Q9NX76 183 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 PFDN2Q9UHV9 154 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 FBXW11Q9UKB1 542 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
SMC5-201ENST00000361138 CCL22O00626 93 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 CLIC3O95833 236 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 HOXC6P09630 235 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 TM4SF1P30408 202 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 ZNF157P51786 506 aaPredicted RBP13.8□□□□□ -0.2
SMC5-201ENST00000361138 MACC1Q6ZN28 852 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 ZC3HC1Q86WB0 502 aaKnown RBP13.8□□□□□ -0.2
SMC5-201ENST00000361138 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 RBFAQ8N0V3 343 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 OR8H3Q8N146 312 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 GPR22Q99680 433 aa13.8□□□□□ -0.2
SMC5-201ENST00000361138 SPATA5L1Q9BVQ7 753 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms