RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 ACOX3O15254 700 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 CLASP2O75122 1294 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 RPP40O75818 363 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 RASAL1O95294 804 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 SIX3O95343 332 aaPredicted RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 GOT2P00505 430 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 SLC4A1P02730 911 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 LRG1P02750 347 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 HGFP14210 728 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ZNF37AP17032 561 aaPredicted RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 HLA-DPA1P20036 260 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 TTKP33981 857 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 TAF10Q12962 218 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 TAF12Q16514 161 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 LRIT3Q3SXY7 679 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 MS4A13Q5J8X5 152 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ITIH5Q86UX2 942 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 PTRH1Q86Y79 214 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 DDIASQ8IXT1 998 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 RYBPQ8N488 228 aaPredicted RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 PDZD8Q8NEN9 1154 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 OVCA2Q8WZ82 227 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 PPP1R14BQ96C90 147 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 TRMT2BQ96GJ1 504 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 TMEM45AQ9NWC5 275 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBA3-202ENST00000361055 DPP7Q9UHL4 492 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 A0A0J9YVX5 310 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ARPC2O15144 300 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 CNTN5O94779 1100 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 FGF1P05230 155 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 GFAPP14136 432 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 HMGA1P17096 107 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 CDH15P55291 814 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 FOXA1P55317 472 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 CLCQ05315 142 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 LCP2Q13094 533 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 GEN1Q17RS7 908 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ALFQ53S48 1182 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 EFL1Q7Z2Z2 1120 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ATP6V0D2Q8N8Y2 350 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 OR4L1Q8NH43 312 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 FAM110BQ8TC76 370 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 TMEM125Q96AQ2 219 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 DERL2Q9GZP9 239 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 INTS10Q9NVR2 710 aaKnown RBP12.29□□□□□ -0.44
UBA3-202ENST00000361055 GMIPQ9P107 970 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 EGFL7Q9UHF1 273 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 POLG2Q9UHN1 485 aa12.29□□□□□ -0.44
UBA3-202ENST00000361055 ANAPC1Q9H1A4 1944 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 OBSL1O75147 1896 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 KERAO60938 352 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 LINC00032P0C843 101 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 PRR35P0CG20 571 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 EEFSECP57772 596 aaKnown RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 YBEYP58557 167 aaPredicted RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 AASDHQ4L235 1098 aaPredicted RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 ACBD5Q5T8D3 534 aaPredicted RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 ANKS6Q68DC2 871 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 DNAJB7Q7Z6W7 309 aaPredicted RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 ADGRD2Q7Z7M1 963 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 TBC1D21Q8IYX1 336 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 ZNF786Q8N393 782 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 SLC22A17Q8WUG5 538 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 MRPL38Q96DV4 380 aaKnown RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 NUSAP1Q9BXS6 441 aaKnown RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 PLGRKTQ9HBL7 147 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 PFDN4Q9NQP4 134 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 DENND4CQ5VZ89 1909 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 NYNRINQ9P2P1 1898 aaKnown RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 MYLKQ15746 1914 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 H3BMM5 538 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 PER2O15055 1255 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 SNAP91O60641 907 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 PFDN1O60925 122 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 NPPAP01160 153 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 GNAO1P09471 354 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 ZDHHC11BP0C7U3 371 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 HOXA9P31269 272 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 PPP3CCP48454 512 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 SERINC3Q13530 473 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 CAPRIN1Q14444 709 aaKnown RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 MYBPC3Q14896 1274 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 POLD3Q15054 466 aaPredicted RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 TYSND1Q2T9J0 566 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 PARP15Q460N3 678 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
UBA3-202ENST00000361055 GPR180Q86V85 440 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 EXT2Q93063 718 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 BTN2A3PQ96KV6 586 aa12.28□□□□□ -0.44
UBA3-202ENST00000361055 NSUN5Q96P11 429 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms