RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ATG16L2Q8NAA4 619 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 CRTAC1Q9NQ79 661 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 IMP3Q9NV31 184 aaKnown RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 V9GYQ6 96 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 MYH4Q9Y623 1939 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 SCN9AQ15858 1988 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 PIPSLA2A3N6 862 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 TMEM63AO94886 807 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 MT-CYBP00156 380 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 DRD1P21728 446 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 S100A5P33763 92 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 SOX11P35716 441 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 CLK1P49759 484 aaKnown RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 ELF3P78545 371 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 SOX4Q06945 474 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 KCNJ11Q14654 390 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 DUSP6Q16828 381 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 ZNF549Q6P9A3 640 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 ENPP7Q6UWV6 458 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 IZUMO2Q6UXV1 221 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 TMEM26Q6ZUK4 368 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 CAMK1DQ8IU85 385 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 CYP4X1Q8N118 509 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 NETO2Q8NC67 525 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 SRFBP1Q8NEF9 429 aaKnown RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 RLN3Q8WXF3 142 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 FIG4Q92562 907 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 KLHDC7BQ96G42 594 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 ZMAT2Q96NC0 199 aaKnown RBP6.97□□□□□ -1.29
RAB5B-201ENST00000360299 MUC13Q9H3R2 512 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 C8orf4Q9NR00 106 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 DNAJC11Q9NVH1 559 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 FAM86C1Q9NVL1 165 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 SLC12A4Q9UP95 1085 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 ASF1AQ9Y294 204 aa6.97□□□□□ -1.29
RAB5B-201ENST00000360299 MYH7BA7E2Y1 1941 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 C2orf78A6NCI8 922 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 TNFRSF10AO00220 468 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 SLC22A2O15244 555 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 PRAMEF1O95521 474 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 C8GP07360 202 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 SLC26A3P40879 764 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 MAPK10P53779 464 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 ATXN1P54253 815 aaKnown RBP6.96□□□□□ -1.29
RAB5B-201ENST00000360299 RPS24P62847 133 aaKnown RBP6.96□□□□□ -1.29
RAB5B-201ENST00000360299 OGDHQ02218 1023 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 LAPTM5Q13571 262 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 LSM12Q3MHD2 195 aaKnown RBP6.96□□□□□ -1.29
RAB5B-201ENST00000360299 XKR6Q5GH73 641 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 MARCH8Q5T0T0 291 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 SULT1C3Q6IMI6 304 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 LRRC74BQ6ZQY2 392 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 ADGRD2Q7Z7M1 963 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 ZDHHC13Q8IUH4 622 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 SLC44A2Q8IWA5 706 aaPredicted RBP6.96□□□□□ -1.29
RAB5B-201ENST00000360299 ZNF786Q8N393 782 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 PCDH20Q8N6Y1 951 aaKnown RBP6.96□□□□□ -1.29
RAB5B-201ENST00000360299 PEX13Q92968 403 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 AP2M1Q96CW1 435 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 SLC2A13Q96QE2 648 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 ZCWPW1Q9H0M4 648 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 KAT6AQ92794 2004 aa6.96□□□□□ -1.29
RAB5B-201ENST00000360299 EDDM13A0A1B0GTR0 161 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 CCDC189A1A4V9 331 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF217O75362 1048 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 WDR47O94967 919 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 PAPSS2O95340 614 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-201ENST00000360299 PSMG1O95456 288 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 NMBRP28336 390 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 HOXA11P31270 313 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-201ENST00000360299 ASMTP46597 345 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 GNPDA1P46926 289 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 LCP2Q13094 533 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 DHCR24Q15392 516 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 LRRC23Q53EV4 343 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-201ENST00000360299 LACTB2Q53H82 288 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-201ENST00000360299 LDLRAP1Q5SW96 308 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 CNTD1Q8N815 330 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 SPPL2AQ8TCT8 520 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 OTULINQ96BN8 352 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 NXNL1Q96CM4 212 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 TCEAL4Q96EI5 215 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 STRADBQ9C0K7 418 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 LRMDAQ9H2I8 198 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 SLC2A4RGQ9NR83 387 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 SPHK2Q9NRA0 654 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 TMEM248Q9NWD8 314 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 RPS6KB2Q9UBS0 482 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 PCDHGC4Q9Y5F7 938 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 TULP2O00295 520 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 NDUFB5O43674 189 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 SLC22A3O75751 556 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 TM7SF2O76062 418 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 FAM58BPP0C7Q3 252 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 ARSAP15289 507 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 SMIM11AP58511 58 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 TRAF2Q12933 501 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 TOMM20Q15388 145 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 IRGCQ6NXR0 463 aa6.96□□□□□ -1.3
RAB5B-201ENST00000360299 CHSY3Q70JA7 882 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms