RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LRRC38Q5VT99 294 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CRAMP1Q96RY5 1269 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ELFN1P0C7U0 828 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 TIGD6Q17RP2 521 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 RNF38Q9H0F5 515 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 E5RJQ4 531 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 AIF1P55008 147 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 RAB5BP61020 215 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 LAPTM5Q13571 262 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CDK10Q15131 360 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SMG7Q92540 1137 aaKnown RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF570Q96NI8 536 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SLC22A2O15244 555 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SCGB1D2O95969 90 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 TRAV19A0A0A6YYK7 116 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ISPDA4D126 451 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 MAN2A2P49641 1150 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 GMCL1P1Q8NEA9 526 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 DQX1Q8TE96 717 aaKnown RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 KAT8Q9H7Z6 458 aaKnown RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 C22orf31O95567 290 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 KCND1Q9NSA2 647 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 UGT2B4P06133 528 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CBX2Q14781 532 aaPredicted RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 COLEC12Q5KU26 742 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CAPN13Q6MZZ7 669 aaPredicted RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 C1orf186Q6ZWK4 172 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SETD4Q9NVD3 440 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 POLR3BQ9NW08 1133 aaPredicted RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 FBXL21Q9UKT6 434 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 PCDHGB6Q9Y5F9 930 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CYP2B6P20813 491 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 FAM35AQ86V20 835 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 PHYKPLQ8IUZ5 450 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SPATA22Q8NHS9 363 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 HSPA12BQ96MM6 686 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 KXD1Q9BQD3 176 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 ISCA1Q9BUE6 129 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 GTPBP2Q9BX10 602 aaKnown RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF99A8MXY4 864 aaPredicted RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 HNRNPLP14866 589 aaKnown RBP eCLIP9.21□□□□□ -0.936e-8■□□□□ 10.3
VPS13A-203ENST00000360280 PRDX6P30041 224 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 LCN1P31025 176 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 TBX2Q13207 712 aaPredicted RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 EHD4Q9H223 541 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 GPSM3Q9Y4H4 160 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SPEF2Q9C093 1822 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 TCRBV9S1A1TA0A576 114 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 CPSF4LA6NMK7 179 aaKnown RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 MAP2K7O14733 419 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 ACVR2BQ13705 512 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 IQCCQ4KMZ1 466 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SPPL2CQ8IUH8 684 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 TLX3O43711 291 aaPredicted RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 MAFKO60675 156 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 PGDP52209 483 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SIM2Q14190 667 aaPredicted RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 ALG10BQ5I7T1 473 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 FAM105AQ9NUU6 356 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 TAS2R3Q9NYW6 316 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF451Q9Y4E5 1061 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 BTNL10A8MVZ5 291 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 H6PDO95479 791 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 TRPM4Q8TD43 1214 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 EBNA1BP2Q99848 306 aaKnown RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 PADI2Q9Y2J8 665 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SSX5O60225 188 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 EDF1O60869 148 aaKnown RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 CCNHP51946 323 aaPredicted RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 NUP54Q7Z3B4 507 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 ERI1Q8IV48 349 aaKnown RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 CBR4Q8N4T8 237 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 POC1BQ8TC44 478 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SMURF1Q9HCE7 757 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 CHST7Q9NS84 486 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 SLC39A1Q9NY26 324 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 TAS2R1Q9NYW7 299 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 RABL2AQ9UBK7 228 aaPredicted RBP9.21□□□□□ -0.93
VPS13A-203ENST00000360280 RABL2BQ9UNT1 228 aa9.21□□□□□ -0.93
VPS13A-203ENST00000360280 CABYRO75952 493 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 UBXN7O94888 489 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 MAP3K8P41279 467 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 MAGEA6P43360 314 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 GRK1Q15835 563 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 GLYATQ6IB77 296 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 DNAJB3Q8WWF6 145 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 PMM1Q92871 262 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 TCEAL4Q96EI5 215 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 KIF13AQ9H1H9 1805 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 RAP1GAP2Q684P5 730 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 DEFB106AQ8N104 65 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CNTD1Q8N815 330 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SEC14L1Q92503 715 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SPATA7Q9P0W8 599 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 ATP6AP2A0A1C7CYW4 349 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CACNB4O00305 520 aaPredicted RBP9.21□□□□□ -0.94
VPS13A-203ENST00000360280 ATP6AP2O75787 350 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CLDN9O95484 217 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SLC15A1P46059 708 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms