RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TIAL1Q01085 375 aaKnown RBP eCLIP13.69□□□□□ -0.224e-8■■■■□ 22.5
PDLIM5-203ENST00000359265 UBXN2BQ14CS0 331 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 CHI3L2Q15782 390 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 TTC31Q49AM3 519 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 TECRLQ5HYJ1 363 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 GPRC6AQ5T6X5 926 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 AGBL4Q5VU57 503 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 KIAA1211LQ6NV74 962 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 ZYG11AQ6WRX3 759 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 SIX5Q8N196 739 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 FSTL5Q8N475 847 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 NKAPQ8N5F7 415 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 AADATQ8N5Z0 425 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 SCAMP4Q969E2 229 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 DCUN1D1Q96GG9 259 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 GPR78Q96P69 363 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 PANX3Q96QZ0 392 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 BOCQ9BWV1 1114 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 FGFR1OP2Q9NVK5 253 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 XPR1Q9UBH6 696 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 MMP17Q9ULZ9 603 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 SCML1Q9UN30 329 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 A0A1W2PP55 124 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 KRBA1A5PL33 1030 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 TK2O00142 265 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 MMP20O60882 483 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 H2AFYO75367 372 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 CHRNB1P11230 501 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 GM2AP17900 193 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 CHRM3P20309 590 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 TARSP26639 723 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 PRKAA2P54646 552 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 ATP6V0D1P61421 351 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 CREB5Q02930 508 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 ASPHQ12797 758 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 ACAP2Q15057 778 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 LDLRAP1Q5SW96 308 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 TMEM207Q6UWW9 146 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 FAM47EQ6ZV65 393 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 DDHD1Q8NEL9 900 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 CD200R1Q8TD46 325 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 GANCQ8TET4 914 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 GRAMD1AQ96CP6 724 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 DERL2Q9GZP9 239 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 COQ6Q9Y2Z9 468 aa13.68□□□□□ -0.22
PDLIM5-203ENST00000359265 A0A1W2PQF6 199 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 CCDC189A1A4V9 331 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 FADS2P1A8MWK0 482 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 CHURC1-FNTBB4DL54 471 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 G3V2L1 256 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 QSOX1O00391 747 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 EDF1O60869 148 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 RNASEH2AO75792 299 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 TM7SF2O76062 418 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 PCDH8O95206 1070 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 SERPINE1P05121 402 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 OR56A5P0C7T3 313 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 CD1DP15813 335 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 TFEBP19484 476 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 GRK2P25098 689 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 ZBTB16Q05516 673 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 PAQR3Q6TCH7 311 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 TMPRSS6Q8IU80 811 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 PHYKPLQ8IUZ5 450 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 C10orf107Q8IVU9 208 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 SPATA6LQ8N4H0 392 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 ANKRD49Q8WVL7 239 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 BTN2A2Q8WVV5 523 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 INPP5DQ92835 1189 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 GLYATL1Q969I3 302 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 FAM136AQ96C01 138 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 PITPNM3Q9BZ71 974 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 OSBPL6Q9BZF3 934 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 ZCCHC2Q9C0B9 1178 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 TBC1D17Q9HA65 648 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 LMAN1LQ9HAT1 526 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 SARS2Q9NP81 518 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 POLMQ9NP87 494 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 CPSF2Q9P2I0 782 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 DHRS7Q9Y394 339 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 PRSS21Q9Y6M0 314 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 DOCK9Q9BZ29 2069 aa13.67□□□□□ -0.22
PDLIM5-203ENST00000359265 ANKRD11Q6UB99 2663 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 FAM170BA6NMN3 283 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 TARM1B6A8C7 271 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 ZBTB14O43829 449 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 MAGEC1O60732 1142 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 TRIM13O60858 407 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms